KEGG   Candidatus Formimonas warabiya: DCMF_04860
Entry
DCMF_04860        CDS       T07208                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
fwa  Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:fwa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fwa03016]
    DCMF_04860
Enzymes [BR:fwa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DCMF_04860
Transfer RNA biogenesis [BR:fwa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DCMF_04860
 Prokaryotic type
    DCMF_04860
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ATW24208
UniProt: A0A3G1KP24
LinkDB
Position
1036513..1037418
AA seq 301 aa
MTDGFINLLKPPGMTSHDAVSLMRKILNIKKIGHTGTLDPGVAGVLPLCVGKATRLAEYV
TNRPKSYRAEITFGLSTDSQDAYGHVERESACTDLRFEQFLDLIPSFVGEIRQIPPMVSA
GRIGGTRLYQLAREGIEVERRPKLIFIYKIAVFQSHWHLPNPSVIFDVVCSKGTYIRTLC
HDMGEKLGVGAYLSFLIRTQSGPFKIEDSLTIEEITRLAGKNNLSFVRPMQEGILFFPPI
TVSDDQANAVLHGNSFILPGSEFREDRLYRVENQENRLLAVGHAIHTTEGVFIFKPEKVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacggacggctttatcaatctgctcaaaccacccgggatgacatctcatgatgcagta
agcttgatgagaaaaatattaaacataaaaaaaattggacatacaggcactttagacccg
ggagtggccggtgttctgcctctttgtgtcggtaaagcaaccaggttagcggaatatgtc
acaaacaggcccaaaagttatcgcgccgaaatcacctttggtttgagcacagactctcaa
gatgcttatggccatgtggaaagagaatcagcatgtacagatttgcgttttgagcaattt
ttggacttaatcccctcctttgtgggggaaattaggcaaattccgcccatggtttccgct
ggccggataggaggaacccggctctatcaattagcccgggaaggaattgaagtagaacga
agaccaaaattaatttttatctataaaattgcagttttccaaagtcactggcacttgccc
aatcccagcgtaatttttgatgttgtttgttccaaaggaacctatatccgcaccctatgc
catgatatgggcgaaaaactgggggtaggggcctatctgtctttcctgatcaggacccaa
tcaggccctttcaaaatagaggattccctaaccattgaagaaataacccgtttagcggga
aaaaacaacctgtcttttgttcgccccatgcaggaaggaattttattttttccgcccatc
acggtgagcgacgatcaagcaaatgctgttcttcatggcaactcctttattttaccggga
agtgaatttagggaagatcgattataccgggtagaaaaccaggaaaataggctcttggct
gtgggacatgctatccataccacggagggggtatttatatttaaaccggaaaaagtattt
ggataa

DBGET integrated database retrieval system