Candidatus Formimonas warabiya: DCMF_05520
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Entry
DCMF_05520 CDS
T07208
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00020
Citrate cycle (TCA cycle)
fwa00190
Oxidative phosphorylation
fwa00650
Butanoate metabolism
fwa00720
Other carbon fixation pathways
fwa01100
Metabolic pathways
fwa01110
Biosynthesis of secondary metabolites
fwa01120
Microbial metabolism in diverse environments
fwa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCMF_05520
00650 Butanoate metabolism
DCMF_05520
09102 Energy metabolism
00190 Oxidative phosphorylation
DCMF_05520
00720 Other carbon fixation pathways
DCMF_05520
Enzymes [BR:
fwa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DCMF_05520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
HI0933_like
Pyr_redox_2
DAO
Cep3
NAD_binding_8
FAD_binding_3
FAD_oxidored
ABC_tran_CTD
Thi4
I_LWEQ
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ATW24320
UniProt:
A0A3G1KPG5
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Position
complement(1166687..1168450)
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AA seq
587 aa
AA seq
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MSKPKIIVVGGGLAGLMATMKIAEKGIKVDLISLVPVKRSHSVCAQGGINAALDTKGEGD
SVWEHFDDTIYGGDFLANQTPVKNMVEAAPGLIYTMDRMGVMFSRTPEGLLDLRLFGGVK
KRRTAFAGATTGQQLLYACDEQVRKHEAAGLVTKYEGWEFLSAVVDEQGICRGCIAQNLA
TMEIRIFTGDAVILATGGGGTIFGKSTNSVICTGSGAGAVYQQGAYLANMEFIQIHPTAM
LGDDKTRLMSESARGDGGRIWTYKDGKPWYFLEEMFPAYGNLVPRDIAARAIYQVCVEMG
LGIEGKNQVYLDLTHLPENFLTRRLGGILEIYEKFHGDDPKKVPMKIFPGVHYFMGGIHV
DWTHMTCIPGLFASGECDYMYHGANRLGANSLLSALYSGTVSGPSALKYVHGLNRLAGEM
DSKPFDQEHRHQVEIEAKIKKMNGKENPYQLHQEMGEVMTQNVAIVRHNKALKETDETLQ
ELRERWENINVVDSNQYSNHTILYIKELRNMMEMARAITLGALIRDESRGSHYKPEFPER
NDEKFLKTSKSRWTSKGPVFEWEEVDTSLIQPRKRVYHVEKEVSKNG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaagccgaaaattattgtggtgggcggtggtttggccggtttaatggcgactatg
aaaatcgccgaaaaagggataaaagtggatctcatttccctggtgccggtgaaacggtcc
cattccgtgtgcgcacagggaggtattaatgccgcccttgataccaagggggaaggtgac
tcggtctgggagcattttgatgataccatttacggaggagattttttggcgaatcaaacg
cctgtgaaaaatatggtggaagcggccccggggctaatctataccatggatcgtatgggg
gtaatgttcagccggacgccggaaggactccttgacttgcgcttgttcggaggagtaaaa
aaacggcgtacggcctttgccggagccactaccggacaacagctgctttatgcttgtgat
gagcaggtgcgtaaacatgaagcggcgggcttggtaaccaaatatgagggatgggagttt
ctctccgccgtcgttgatgaacagggaatttgccggggatgtattgctcagaatcttgcc
accatggaaatccgtattttcaccggagatgccgtgattctggcaaccggcggtgggggc
acgatttttggcaagagcaccaattccgtgatctgtactggaagcggggcaggagctgtc
tatcagcagggggcctatctggcaaatatggaatttatccagattcatcctaccgcgatg
ctgggtgatgacaagacccggctgatgtccgaatctgcccggggtgatgggggaagaatt
tggacctataaagatgggaaaccgtggtattttttagaggaaatgtttcccgcatacggg
aatttggtgccccgagacattgcggcccgggctatttatcaagtgtgcgtggagatgggc
ctgggcattgaggggaagaaccaggtgtacctggatttgacccatttgccggaaaacttc
ttaacccgccgtttaggcgggatcctggagatttatgaaaagtttcatggggatgatccg
aaaaaggttcccatgaaaattttccccggtgtgcattattttatgggggggatccatgta
gattggacgcacatgacctgtattcccggcctctttgcttccggagagtgtgattacatg
tatcacggcgctaaccggctgggtgccaattccttgctctctgccttatacagcggtacg
gtatccggaccttctgccctaaaatatgtacatggtttaaacaggttagccggagaaatg
gacagtaaaccatttgatcaggaacatcggcatcaagtagaaattgaagctaaaattaaa
aaaatgaatggaaaagaaaacccctatcaactgcaccaggaaatgggagaggttatgacc
cagaatgtagctattgtccggcataacaaggctttaaaggaaacggatgaaacacttcaa
gagctaagagagcgctgggaaaatatcaatgtggttgattccaaccagtatagtaaccac
accatactttacatcaaagaattgcgtaatatgatggaaatggcccgtgctattacgctg
ggagcactgatccgggatgaaagccgggggtcccattataagccggagtttccggaaaga
aatgacgaaaagtttttgaaaacgtcaaaatcccggtggacatcaaaggggccggtattt
gaatgggaggaagtggacacctcattgatccagccccggaaaagagtctatcacgtagaa
aaggaggtttctaagaatggataa
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