Candidatus Formimonas warabiya: DCMF_05730
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Entry
DCMF_05730 CDS
T07208
Name
(GenBank) glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00362
Benzoate degradation
fwa00620
Pyruvate metabolism
fwa00650
Butanoate metabolism
fwa01100
Metabolic pathways
fwa01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
DCMF_05730
00650 Butanoate metabolism
DCMF_05730
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DCMF_05730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_05730
Enzymes [BR:
fwa01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
DCMF_05730
Transporters [BR:
fwa02000
]
Other transporters
Primary active transporters [TC:
3
]
DCMF_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
ATW24350
UniProt:
A0A3G1KPJ8
LinkDB
All DBs
Position
complement(1210004..1211254)
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AA seq
416 aa
AA seq
DB search
MEELFKGILMFKWQYLVMYGIGGLLIYLAIKKDYEPMLLLPIGFGAILVNIPLQSIWHYE
PEFDQTVTNIVANYPLLQSYFEQNLHYIFQNGQAFQVEPGVLQLFYNSGILTEIFPVLIF
VAVGAMCDFTPLLKNPRMIFFGAAAQFGIFFTMLAVLLIGALGIESFQDLKLAASIGIIG
AADGPTSIFVASKFAMEWLGPISVAAYSYMSLVPIIQPPVIKAITTKKERMIRMKYTEEK
VSKSVLILFPIMVTVVAGIIAPISVPLIGLLMFGNLIRVSGCVERLSQAAQNELANLVTL
LLGITIGASMGYEQFLRWETLMILALGLVAFVFDTVGGVLFAKLMNLFTKEKVNPMVGAA
GISAFPMSARVIQKLAQKEDPTNFVLMQAIGANVSGQIGSIIAGGMVLALVPYLLR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattgtttaaaggaattttaatgttcaaatggcagtacttggtgatgtatggc
attgggggacttttaatctatctggccatcaaaaaggattatgagcccatgctgttactg
cccatcgggtttggcgccattttagtaaatattcctttgcagtcgatttggcactacgag
ccggagtttgaccagaccgtgacaaatattgtcgccaattatcctttgctgcaaagttat
tttgaacagaacctgcattatatttttcaaaatggccaggcctttcaagtggaaccggga
gttttacaattgttttataattccgggattctcacggagattttcccggtgctgatattt
gtggcggtgggcgctatgtgtgattttacacccctcttaaaaaatccccgcatgattttc
ttcggtgccgccgctcagtttggcatattttttaccatgctggcggttctcttgatcggt
gctttagggatcgagtctttccaggacttaaagctggctgcgtccattgggattattggc
gcggctgacggaccaacctcaatttttgtcgcatccaaatttgccatggaatggctgggg
cctatttctgtggccgcatattcctacatgtctttagttcccattattcagcccccggta
atcaaggccatcacgacgaaaaaagaacgcatgatccggatgaagtatacggaagaaaaa
gtatccaaatccgtgctaattttgtttcccattatggtgaccgtcgtggccggaattatt
gccccgatcagtgttcctttaatcgggctcttaatgtttggaaatttaatccgggtatcc
ggatgcgtagaacggttatcccaggcagcgcaaaatgaattggccaatctcgtgacattg
ctcttagggatcacaattggggccagtatgggatatgaacagtttttacggtgggaaaca
ctgatgattttagctttagggctagtggcttttgtgttcgatacggtgggaggcgttctt
tttgccaaactgatgaatttatttaccaaggagaaagtgaaccccatggtaggagcggcc
gggatttctgcttttcccatgtcggcgcgggtgattcaaaaactggcccaaaaagaagac
ccgacaaatttcgtattaatgcaggccattggggccaatgtgtccgggcagatcggctct
attatcgccggcggcatggtcttggcattggtaccatatttactcaggtag
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