Candidatus Formimonas warabiya: DCMF_06310
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Entry
DCMF_06310 CDS
T07208
Name
(GenBank) glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00362
Benzoate degradation
fwa00620
Pyruvate metabolism
fwa00650
Butanoate metabolism
fwa01100
Metabolic pathways
fwa01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
DCMF_06310
00650 Butanoate metabolism
DCMF_06310
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DCMF_06310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_06310
Enzymes [BR:
fwa01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
DCMF_06310
Transporters [BR:
fwa02000
]
Other transporters
Primary active transporters [TC:
3
]
DCMF_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
ATW24444
UniProt:
A0A3G1KPP9
LinkDB
All DBs
Position
complement(1329770..1330936)
Genome browser
AA seq
388 aa
AA seq
DB search
MDLSNSLIQFIETTGFANLTWGNVLMIGVACVLLFLAIKKGFEPLLLVPIGFGMLLANIP
ISGITAPPVMELGPDGLPVVKEVGGLLYYIFQGDVLGIFPPLIFLGIGAMTDFGPLIANP
KSLLLGAAAQLGVFLTFWGALFLGYIPKEAASIGIIGGADGPTAIFLTTRLAPYLLGPIA
VAAYSYMALVPIIIPPVAKLFTTKAERQIVMKQLKPVSKTTKILFPIVATILVSLTLPPA
TPLIGMLMLGNLFRECGVVERLSDTVQNALINIVTIFLGTTVGATATAEAFLNWKTIGIF
LLGAFAFAGGAAGGVLLAKLMNLFVKEKVNPLIGAAGVSAVPMAARVVQKMGQQENPRNF
LLMHAMGPNVAGVIGTAVAAGVLLTLYR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagcaacagtcttatccagtttatagaaacaactggttttgctaatttaaca
tggggaaatgttttaatgataggcgtggcatgcgtgctgctttttctggcgataaaaaaa
ggatttgaacccctgttgctggtacccatcggattcggcatgctgctggcgaatatcccg
atatccgggattacagcacccccggtaatggagctgggaccggatgggttgcctgttgta
aaggaagtcggggggttgctctactatatctttcaaggggatgttctggggatctttcct
cctttgatttttttggggatcggagctatgaccgatttcgggcccttaattgccaacccc
aagagtctcttattgggcgcagcggcccagttaggggttttcctgaccttctggggagcc
ctcttcctgggatacatacctaaggaagccgcatctatcggcattatcggcggagcagac
gggccaactgcaatctttcttaccaccaggctggcgccctatttattaggtcccattgcc
gtagcagcctattcctatatggctttggtgccgatcattattcccccggtggccaaactg
ttcaccaccaaagcagaacggcagattgtcatgaaacaattgaaaccggtcagcaaaacc
acaaaaattttatttcccattgttgctaccattctggtttctctcacacttcctccggcg
acaccgttgattggaatgttaatgctgggtaaccttttccgggaatgcggagtggtcgag
agattatccgatacggtgcaaaatgccttaattaatattgtcaccatctttttaggcaca
acggttggtgccacagccactgccgaagcatttctgaattggaaaaccatcggcattttc
ctgctgggcgcttttgcttttgccggtggggccgccggtggagtattgttggccaaactg
atgaatctatttgtgaaggaaaaagtgaacccgctcattggagcggcgggagtatctgcg
gtaccgatggcggctagagtggtacaaaaaatggggcaacaagaaaacccgcgaaacttt
ttattgatgcatgccatggggcctaatgtggccggtgtcatcggcaccgcagtggcggca
ggtgtactgcttaccctttatcgataa
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