Candidatus Formimonas warabiya: DCMF_07480
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Entry
DCMF_07480 CDS
T07208
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00300
Lysine biosynthesis
fwa01100
Metabolic pathways
fwa01120
Microbial metabolism in diverse environments
fwa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCMF_07480
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fwa01002
]
DCMF_07480
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DCMF_07480
Peptidases and inhibitors [BR:
fwa01002
]
Metallo peptidases
Family M20
DCMF_07480
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ATW28437
UniProt:
A0A3G1L196
LinkDB
All DBs
Position
complement(1573329..1574723)
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AA seq
464 aa
AA seq
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MEKIVDRFQDSLIQSTQDLIRIKSVQGNPEPGMPFGRGPYLALMYVLALADRFGFTTKNV
DGYAGHAEYGHGKETVGVLVHVDVVPGGEDWIFPAFAGEIHDGRIYGRGAVDDKGPAVAA
LYALKAIKESGIKSSKKIRIVFGTDEETSFAGMKYYLSKEPAFDIGFTPDGNFPVINGEK
GILVLKLKKQFARPMSGNIKIKSIKGGEAVNQVPDLCTAVLEVVAGQEVLINERVEEFNK
KFGNCLKSEQNGKEIVFVMKGESSHASMPEDGINAISLLMLFLNELGVIRDDLGDFIRIY
HEKIGLEHHGESICCGFRDALSGKLTLNVGIIDCNTQGVAVTVDIRYPITTKVDQVRDGI
WHALEGTGITVEQTDHDPPIYFPEEHFLVRKLLHAYAEATNDHQSGPMIIGGGTYARAAK
NMIAFGPVFPGEKELAHQKNEFISIDNLVKITKIYAASLWELAK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ctggaaaaaatagtcgaccgctttcaggattctttaattcaatcaacacaggatctgatc
agaataaagagtgttcaggggaatcctgaaccgggcatgcctttcggtagagggccttat
ttagcactgatgtatgtactggcactggcagatcgttttggttttacgactaaaaatgta
gatggctatgcaggtcatgctgaatacgggcatggcaaggaaactgtgggcgtgctggtt
catgtggatgtggtgccgggaggagaagattggattttcccggcttttgcaggagagatt
catgatggcaggatctatgggagaggtgcggtagatgataagggaccggcggtagcggca
ctctatgcattaaaggcgatcaaagaatcagggataaaaagcagcaagaagatcaggatt
gtcttcggaaccgacgaagaaaccagttttgcgggaatgaagtactatttatcaaaagag
ccggcatttgatattggttttacccctgatggaaattttcctgtgatcaatggcgaaaag
ggtattctggtattgaagttaaaaaagcaatttgcccgccccatgtccggtaatattaaa
attaagtctattaaaggcggggaggcggtaaaccaggttccggatttatgcacggctgtg
ttagaggtggtagcggggcaggaagtattgataaacgaacgggtcgaagagtttaataaa
aagtttgggaactgtttaaagtctgaacagaatgggaaagaaatagttttcgtgatgaag
ggggaatcatcacatgccagtatgccggaagatggcatcaatgcgatttctttgctgatg
ctgttcttaaacgagcttggcgtgatcagggatgacctgggtgattttatcaggatatat
catgaaaagatcggattagaacatcacggggaatctatttgctgcggctttcgtgatgcg
ttatccggaaagttaactctaaatgtgggaatcattgactgtaatacgcaaggggttgcg
gtaaccgttgacattagatatcccatcacaaccaaagttgatcaggtaagggacggaatc
tggcatgctttggaaggaaccggaattacagttgagcaaactgaccacgatccgcccatt
tattttccggaagagcattttctcgtgcgaaagctgctgcacgcatatgcagaagccact
aatgaccatcaaagcgggccgatgattattggcgggggaacatatgccagggcggctaaa
aatatgattgcctttggtcctgtatttcccggtgaaaaagaattagcccatcaaaaaaat
gaattcatatcgatagacaacttagtaaaaattaccaagatatatgccgcatccttatgg
gaactggcaaaataa
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