Candidatus Formimonas warabiya: DCMF_07520
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Entry
DCMF_07520 CDS
T07208
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_07520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_07520
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DCMF_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ATW24647
UniProt:
A0A3G1KQD4
LinkDB
All DBs
Position
complement(1582009..1583598)
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AA seq
529 aa
AA seq
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MKKGIIAKGFILCLMLTLILTLLSGCGGGDQTGGDTQEPSIAYYSYFSEPVTDWDPSVES
SSGYIVMNNIYETLLRYDPVEDKFIYVLATNYTKSEDGLTWTFEIRKGVKFHDGSEVNAQ
AVKFSVDRTKRLGKGLSYIWDPVEQVNVIDDYKVEFKLKSPAPLDLIVSSSTCAFIMSPE
TVSAQPDDWLSQGHEAGSGPYMLESQTMGQQVVMTRFPDYWQGWEGNHFDKAVVAKNAET
SSRRQLVEKGDADITMTLPAEDLASLKDNSNVIVKILPSFENMMLFFNTENEILSNKTVR
QALSYAFPYDDVIKYAFGDLAKRATGPIPAGMWGHSDKLFQYQYDLTKAKELLAQAGYPN
GGFQLELTYQSGDEERRKIAELYKAELAKLNIDLAVQAMPWESQWAKSKNPDPKDRQDVF
LMGWWPDLPSPYSWLYTLFHTEKEIFFNLDYYKNPEFDQMIDEANSISGLDREKAAEMFI
KAQEILLDDAPVIYAGDKQYVYVLNKSFKGHVYNPVYSNVVWFYDAYRE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtatcattgccaaaggatttattttatgtttgatgttgaccttaatttta
accctcctatccggatgcggtggtggcgaccagaccgggggcgatacccaagagccttca
attgcttattattcttatttttccgagccggtcaccgattgggacccttccgttgaatca
tcaagcggctacatagttatgaacaatatttacgaaacccttctccggtatgaccctgta
gaagacaaatttatttatgtcctggccacaaattataccaaaagtgaagacggtttgaca
tggacttttgagatcagaaaaggggtaaaatttcacgacggcagcgaagtaaatgcccaa
gcggtgaaattctccgtggacaggaccaaacggctgggcaaaggattgtcctatatttgg
gacccggtggaacaggttaatgtgattgacgattacaaggtggaatttaagctaaagagt
cctgctcctttggatttgattgtctcttcaagtacctgtgcttttatcatgtcgccggaa
accgtttctgcacaaccggatgactggctgtcccaagggcatgaagccgggtccggtccc
tatatgctggaaagccaaaccatgggacaacaagtggtcatgaccagattccccgattat
tggcaagggtgggaagggaaccatttcgataaagccgtggtggcaaagaatgcggaaacc
tcaagccggcgccagctggtggaaaaaggagatgccgatatcaccatgaccctcccggca
gaagatttagccagcctgaaagacaattccaatgtgatcgtgaaaatattgccttcattt
gaaaatatgatgcttttcttcaataccgaaaatgaaattctcagcaataaaactgtccgg
caagccctttcctatgcgtttccctatgacgatgtcattaagtatgccttcggggatttg
gcgaaacgggctaccggacctattcctgcaggcatgtggggtcatagcgacaagctcttt
caatatcaatacgacctgactaaggccaaagagcttttggcgcaagccggctatcccaat
ggcggctttcaactggagctgacttatcaatccggagatgaggaaagaaggaaaattgca
gaactgtacaaagcggagctggcaaaattaaatattgatttggcagtccaggctatgcct
tgggaaagccagtgggcaaaatcgaaaaaccctgatccaaaggacaggcaggatgtattt
ttgatgggctggtggccggatctgcccagtccatattcctggttatatactttatttcac
acggaaaaggaaatctttttcaatctggattattataagaatccggagtttgatcagatg
atcgatgaggcaaatagtatttccggtcttgacagggaaaaagccgcagaaatgtttatc
aaggctcaggaaattttgctggatgatgctccggtaatttatgccggcgataagcaatat
gtttacgtgctcaataaatcctttaaaggccacgtatataacccggtttacagcaacgta
gtttggttttatgacgcctaccgggaatag
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