Candidatus Formimonas warabiya: DCMF_07555
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Entry
DCMF_07555 CDS
T07208
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fwa03019
]
DCMF_07555
03009 Ribosome biogenesis [BR:
fwa03009
]
DCMF_07555
03036 Chromosome and associated proteins [BR:
fwa03036
]
DCMF_07555
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DCMF_07555
Messenger RNA biogenesis [BR:
fwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCMF_07555
Ribosome biogenesis [BR:
fwa03009
]
Eukaryotic type
90S particles
RNase
DCMF_07555
Prokaryotic type
rRNA processing factors
DCMF_07555
Chromosome and associated proteins [BR:
fwa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DCMF_07555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ATW28441
UniProt:
A0A3G1L1B0
LinkDB
All DBs
Position
complement(1590524..1591228)
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AA seq
234 aa
AA seq
DB search
MLASLNIDLESYDLVNQALTHPTFVYEHKKQGLIHNQRLEFLGDAVLGLVVGDYLYHQFP
ERPEGDLTKMRAAVVCESFLAERARELNLGEYLLLGRGEEMCGGRDRVSILADAFEALLG
AIYLGCGIETAKSLVINWLEDIVRGLDLKDCGDYKTMLQELTQKHGGEGVSYIILEESGP
DHNKKFLAGVKFKERLLARGWGRNKKEAEQKAAQAALQDMDVWRPYLHGESNDS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgctggccagtctgaatattgatttggaaagctatgatttggtaaatcaagcattgacc
catcccacctttgtctatgagcataaaaagcaggggctgatccataatcagcgtttggaa
tttctgggcgatgccgtattggggctggtggtgggagattatttgtatcatcaatttccg
gaacgtccggagggggatctcaccaaaatgcgggcggccgttgtctgtgaaagcttttta
gcagagcgggccagggaattaaacctgggggagtacttactgctgggacggggagaggaa
atgtgcgggggcagagacagggtgtccattttagcggatgcctttgaggccctgttaggc
gccatttatctcggttgcggcattgaaacggcgaaaagcctggtcattaactggttggag
gatattgtccgggggctggacctgaaagactgcggcgattataaaaccatgctgcaggag
ctaacccaaaagcacgggggagaaggcgtgtcttatatcattctggaggaatcgggaccg
gatcacaataaaaagtttttggccggggttaagttcaaggaacggcttttagccaggggt
tggggccgtaacaagaaggaagcggagcaaaaggcggcccaagccgcgctgcaggacatg
gatgtctggcggccttatctccatggtgaaagcaatgattcatga
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