Candidatus Formimonas warabiya: DCMF_07875
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Entry
DCMF_07875 CDS
T07208
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fwa03000
]
DCMF_07875
Transcription factors [BR:
fwa03000
]
Prokaryotic type
Helix-turn-helix
Other families
DCMF_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_9
AAA_5
PAS_4
Mg_chelatase
AAA
HTH_30
AAA_7
bpMoxR
PAS_8
AAA_3
TSC22
Motif
Other DBs
NCBI-ProteinID:
ATW24704
UniProt:
A0A3G1KQG5
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All DBs
Position
complement(1657366..1658832)
Genome browser
AA seq
488 aa
AA seq
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MKNDKEIIEELKQENKALEWENQLLKTIMDCIHEGVFVTNANGEIILYNRVVEKTEGMKR
EEVLGRREEDVYSFSSEYFFHETVTNKVRKTGKSVVEQHYEYSLPDGRKTSILFSTFPFY
YKGQISAVYTVGRNVNQIGEFIAKTLEMQKKLFREENNQSHRAKYLLEDIIGISEKICEA
VLLARKVATHKSPVLIIGETGTGKELFAHGIHNASLYAKGPFVPINCAAIPETLLESVLF
GTVKGAFTGAVDIPGLFEQAEGGTIFLDEINSMPFPVQAKLLRVLQDKVIRRIGSTMEIP
VNCKIVSATNVDPFRIENEKIIRPDLFFRLATVAINIPPLRERKEDIKVLCANFIKKYNR
EFGLFVEGISDALIELFEKYHWPGNVRELENIIESGMNCVDGDKKTLKLDHIPVYFRNRI
RKLMEQHLEAGYSGELHKTLADYEKKFIEQALKKNQGNISKTADDLGIWRQNLHYRIKKF
GIEVRETP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgataaagaaataattgaggaactcaaacaggaaaacaaggcactggaatgg
gaaaaccaactgctgaaaaccatcatggactgtattcatgaaggagtgtttgttaccaac
gcaaacggggaaataattctctataatcgtgtggttgaaaaaacagaggggatgaaacgg
gaagaagtattaggaaggagagaagaagatgtatattccttttcatcagagtatttcttc
catgaaacagtaaccaacaaggtaagaaaaacaggcaaatctgtcgtggagcagcattat
gaatatagtttgcctgacggacgaaaaaccagcattttattcagcacatttcctttttat
tataagggccaaatttctgccgtttatacggtagggcgtaatgtaaatcaaattggtgag
tttatcgcgaagacactggaaatgcaaaaaaaactattcagggaagaaaacaatcaaagt
catagagcaaagtatcttcttgaagacattatcggcattagtgaaaaaatttgtgaggca
gtactacttgcccgtaaagtagctacccacaaatcccctgttttaatcattggagaaacc
ggcacgggaaaagaactttttgcccatggaatccataatgccagtttgtatgcgaaagga
ccctttgtccccattaattgtgctgctatcccggaaacacttcttgagagtgtactattt
ggcacagttaaaggggcttttaccggggcggtggatattcccggattgtttgaacaagct
gaaggagggactatctttttagatgagattaattctatgccctttccggtgcaagcaaag
cttttaagggttctccaagataaggtgatcagaaggattggcagcacaatggaaatacct
gttaactgtaaaattgtcagtgcaacgaatgttgatccgtttcgtattgaaaacgaaaag
ataattcgaccggacctttttttccgattagcaacagtggcgattaacattccgcctctg
cgggaaagaaaagaagatatcaaagtgctttgtgctaatttcataaaaaaatacaatcga
gagtttggattatttgtggaaggaatttccgatgcattaattgagctttttgagaaatat
cattggccggggaatgtgagggaattggagaatattattgagagtggaatgaactgtgtt
gatggggataaaaaaacattaaaactagaccatataccggtatattttaggaataggatt
cgaaaattaatggagcaacatcttgaagctggctattccggtgagcttcacaaaaccttg
gctgattatgaaaagaaatttattgaacaagcacttaagaagaatcagggtaatatttct
aagacagcagatgacttagggatttggcgtcaaaatctccattatcgaattaaaaaattt
ggtattgaggttcgtgagactccttaa
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