Candidatus Formimonas warabiya: DCMF_08640
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Entry
DCMF_08640 CDS
T07208
Name
(GenBank) hypothetical protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_08640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_08640
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DCMF_08640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ATW24832
UniProt:
A0A3G1KQT0
LinkDB
All DBs
Position
complement(1820538..1821392)
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AA seq
284 aa
AA seq
DB search
MSDNRTARYFLTIPSIFLAAALFIPMIYMIILTFHSNSTGALSLENYQRFFADSYYLKDV
LWISIKQGILSGILALILGYPVALYIAKTKNKNIKTLLLILSIVPLWVNVIIRVFGWRIL
LSDHGLINEALLTLGLIGSPIKFLATELGVLIGLVQITIPFIVLPLVGVLESMPTSLEEA
AYSVGARPFRTFLSITFPLSMPGVMSGLLMSFALNAGGYAIPAMLGGGKVRMLAVVAYDQ
SMSVGNFNFAALLGLMLLVTCMLFIIPSIMLSNRLYYGKRKGSR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatcgcaccgctaggtattttctcacaatccctagtatttttttggcggca
gccctgtttatccccatgatctatatgatcatccttacctttcattccaattcaaccggt
gctctttcattagaaaactaccagcgcttttttgccgattcatactatttaaaagatgtc
ttgtggatttccatcaagcaaggcatattatcaggaattttggcattgattttgggctat
ccggtcgcactctatattgctaaaaccaaaaacaaaaatataaagacgctgctcttgata
ctttctattgttcctttatgggttaacgttatcatcagggtttttggctggcgtatactc
ttgtctgatcatggcctaattaatgaagcgcttttgactctgggactgataggttcgccg
ataaaattcttggctacagagcttggcgttctgataggtttggttcagattaccataccc
tttattgttctgccgctggtgggcgtattggaatccatgccgacatctctcgaggaagca
gcctacagcgttggtgccaggcctttcaggacctttttgtccattactttccctttaagt
atgccgggcgtcatgtccggattgttgatgtcctttgccttaaatgccggcgggtatgca
atccctgccatgttgggcggtggtaaagtaaggatgctggcagtcgttgcctatgaccag
tcaatgtcggtcggcaactttaactttgccgcgttgctgggtctgatgctattggtgacc
tgtatgctttttattataccgtcgatcatgttgagcaaccgtctatattacggtaagaga
aaggggagtcgataa
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