Candidatus Formimonas warabiya: DCMF_09390
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Entry
DCMF_09390 CDS
T07208
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02010
ABC transporters
fwa02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DCMF_09390
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DCMF_09390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_09390
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DCMF_09390
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GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
DUF4969
Motif
Other DBs
NCBI-ProteinID:
ATW24958
UniProt:
A0A3G1KR73
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All DBs
Position
complement(2008175..2009287)
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AA seq
370 aa
AA seq
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MKKFSVLLISVMMFCLIMMLTACSSQEPAANDEPAPSTDAEKKIIGMVVRDINTPYVIAM
IKGAQAKCDELGYTLDVQDGRGDNLQILEHIDNFISKGVSGYIMAGAIDLKGVVPGIKKL
NGAGIPVMALDSCPEGGHVDMFVNFDNINETKRAANVFIEGIKARNNGEVPEGVVIYITG
ALQDMITGLIDKGFQEVMAQYPQLTIAPGEGKWNNEDSYERTAELLTRYGDKVVGVYVQT
PDIMGAGAVRAIETANLDPKDYGVCGIHIGPEWLEYIKEGKVLATVEFPGYDCANLAVKY
IDDMNQGIPLPKIGDTITKEGAIWSPAVVEDIKTQSPNADGLYLAVQGKLIPTEVSADDE
RLWENMLKKW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttttcagtattgctaattagtgtaatgatgttttgtttgattatgatgctg
acagcttgctcatcacaggaaccggccgctaacgatgaacctgcaccctctacagacgcg
gaaaagaagatcattggtatggtagtcagagatattaataccccttatgtgatagcgatg
attaagggcgcacaggcaaaatgcgatgaactggggtatacccttgacgttcaggacgga
cgcggcgataatttgcagatccttgaacatatcgacaatttcatcagcaagggagttagc
ggatatattatggcgggcgccatcgacctgaaaggagtagttcccggcattaaaaaactg
aatggggccggaattcctgtcatggccttggacagttgtcctgaagggggccatgtggat
atgtttgttaacttcgacaacatcaatgaaaccaagagagcagccaatgtatttattgag
ggtatcaaggccagaaacaacggtgaggtccccgaaggtgtagtcatatacatcaccggt
gccctgcaggatatgatcaccgggttgatcgataaaggattccaggaagtgatggctcaa
tatcctcagcttaccatcgctccgggagaaggcaaatggaacaatgaggattcctatgag
aggactgcggaactgttgacccgttacggtgataaagtagtcggagtctatgttcaaacc
ccggatatcatgggcgccggcgctgtcagggcgatcgagacggcaaatcttgaccccaaa
gattatggggtatgcggcatccacatcggtccggaatggctggagtatatcaaagaaggt
aaggttttggccacggttgaattccccggctatgactgcgcgaatctggccgtaaaatac
atagacgatatgaatcagggcatacctctgccgaagattggcgataccattaccaaagaa
ggcgccatctggtcgcctgccgtagttgaagatatcaaaacccaaagtcccaatgcggat
ggcttatacctggctgtccagggtaagctgattcctaccgaagtttctgccgatgatgaa
cggttgtgggaaaatatgcttaaaaaatggtaa
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