Candidatus Formimonas warabiya: DCMF_09970
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Entry
DCMF_09970 CDS
T07208
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00550
Peptidoglycan biosynthesis
fwa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DCMF_09970
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fwa01011
]
DCMF_09970
Peptidoglycan biosynthesis and degradation proteins [BR:
fwa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DCMF_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ATW25059
UniProt:
A0A3G1KRH1
LinkDB
All DBs
Position
complement(2142000..2144213)
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AA seq
737 aa
AA seq
DB search
MGNSQGQSKLTPEEWRGTVQTTTIMMRRRIACLFFGAIAVFFLLLLRLAYLQFALGSELQ
LKAEQLRMREIPIAAKRGTIYDRNHKKLAVSVSADSVYALPPEVKYSGKEEDIAKQLSPI
LGIPQDQILKKITAARSFEWLQRKVDFAKAQKIKQLDLPGIKVVEESQRFYPKDTLASHV
LGFAGVDNQGLEGIEITRDAELKGVPGNIVIEYDAKGRELPGAVHKYNPPVDGNSLVLTI
DETIQYFAERELDKAMNGPSKPKSATIIVMQPKTGEILALANRPTYDSNNYAKFDPQTWR
NIAVSNTYEPGSTFKIITTAAALEEGVVKPDDRFYDPGYIVVGDRRIRCWRYYNPHGSES
FREVIQNSCNPGFVEVGLRLENKEKGIFYKYIKAFGIGATTSLGLPGEAPGIMIPEKDLK
PINIATISIGQSIAVTPLQIITAASAVANGGVLMEPQIVREVVDANNKVIKGFQPKPVRR
VISEQTAQVERELLEGVVSQGTGRNGYVPGYRVGGKTGTAQKPGPGGYQQGKYVASFLGM
APVNDPQLVVLVILDEPQGYPYQGGQIAAPVFKAVMEDSLRYLGVVAQYAPGEEDAQGPE
ATVKMVTVPEVINLSAEEATKVLKLEGLKVEIKGTGKVVTEQTPAGLAKVKEGSTVLLRL
GTADKSLIPGTVTVPDLTGKRIREVADLLGAMGLKLDPEGRGAVVRQEPIPGSKIKAGDA
VKVYFSEEEATEETIGP
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacagccaaggacagagcaaattaacccctgaggagtggaggggcactgtgcaa
actacaacgattatgatgagacgaaggatagcgtgtctcttttttggagcaatagctgtc
ttctttcttttattgttacgtttagcgtatctccaatttgccttgggcagtgaactgcag
ctaaaagcggagcagctccggatgcgggaaattcccattgccgcgaaacggggcaccatt
tatgaccgcaatcacaaaaagttggctgtgagtgtcagtgccgattctgtttatgccctt
ccccccgaggtgaaatattccgggaaggaggaagacattgccaaacaattgtctcccatt
ttaggcattccccaagatcagattttgaaaaaaattactgcggcccgttcctttgagtgg
ctgcaacgcaaggtggattttgccaaggcccaaaagatcaagcagttggatctgcccgga
atcaaagttgtggaggaatcgcagcgcttttatcccaaggatacgctggcttcccatgta
ttaggttttgccggggttgataaccagggactggaaggaattgagattacccgggatgcg
gaattaaaaggggtaccgggaaatattgtcatcgaatatgatgccaagggccgggaactg
cccggggccgtacataaatacaacccgcccgtggacgggaacagtctggtcctcaccatt
gatgagacgatccaatattttgcggaacgggaactggataaggcgatgaatggcccctct
aagccgaaaagtgccaccattattgtgatgcagcccaagacgggggaaattttggccctg
gccaaccgcccgacttacgattccaataactacgccaagtttgatccccaaacctggaga
aacattgccgtttccaatacttatgagcccggatctacttttaagattatcaccacagcc
gcagctctggaagaaggggttgttaagccggacgaccggttctatgaccccggctacatc
gttgtgggcgaccggcgcatccggtgctggcgttattacaatccccacggcagtgagtct
ttccgggaagtgatccagaattcctgtaaccctggtttcgtggaagtgggtttgcgcttg
gagaataaggaaaaaggcattttctataaatatattaaagcctttgggattggagcgact
accagcctgggccttcccggagaagcccccggcatcatgattccggaaaaggacttaaag
cccatcaacatcgccaccatttccatcggccaatccattgcggtaacccctttgcagatt
attaccgccgcgtccgccgtggccaacgggggcgtgctgatggagccgcagattgtccgg
gaagtggtcgacgccaataataaggtgatcaagggttttcaaccaaagcctgtgcgccgg
gtgatttccgaacaaacggcccaagtggaaagagagctgctggaaggcgtggtttcccag
ggtaccggccgaaacggctacgtacccggataccgggtcggggggaagacggggacggcg
cagaagccgggacccggcgggtaccagcaggggaaatatgtggcctcctttctcggcatg
gcgcccgttaatgatccccaactggtagttttagtgattttggatgaaccccaggggtat
ccctaccagggggggcaaatcgcggctccggttttcaaagctgtgatggaagatagcctg
cgctatctgggcgtagtcgcccagtatgctcctggggaggaagatgcccagggacctgag
gcaaccgtgaaaatggtcaccgttcccgaagtgattaatctatctgccgaagaagcaacg
aaggttttgaaactagagggtttaaaagtggagatcaagggtacgggaaaagtggtcacc
gagcagactccggccgggttggccaaagtgaaggaaggcagtaccgtcctgctgcgctta
gggacggcagacaaatccctgattcccggtactgtgacggtccctgaccttacaggcaag
cggattcgggaagtcgcagatttgttgggtgccatgggcttgaaattggatcctgagggc
cggggtgcggtggtgcgccaggagcccattcccgggtctaagatcaaagcgggagatgcg
gtcaaagtatacttctccgaggaggaagccacggaggaaacgattggcccctaa
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