Candidatus Formimonas warabiya: DCMF_12495
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Entry
DCMF_12495 CDS
T07208
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fwa03019
]
DCMF_12495
03009 Ribosome biogenesis [BR:
fwa03009
]
DCMF_12495
Messenger RNA biogenesis [BR:
fwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCMF_12495
Ribosome biogenesis [BR:
fwa03009
]
Prokaryotic type
rRNA processing factors
DCMF_12495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TRAM
RNase_E_G_Thio
KH-I_KHDC4-BBP
S1
KH_1
RD3
HTH_NOL4_2nd
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ATW28570
UniProt:
A0A3G1L1P6
LinkDB
All DBs
Position
complement(2704643..2706310)
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AA seq
555 aa
AA seq
DB search
MDPEETAVAVVEDQQLVEIYLERSSNQRLAGNIFKGIVENVLPGMQAAFVDIGLEKNSFL
YVEEAVPQRVGEDDADGEPRHYSIGEVLKEGQEILVQIAKEPIGTKGARVTTHLTLPGRY
VVLMPTVDYVGISRRIESEPERKRLKALAEQVKPEGMGLIVRTVAEGMSQEELAADIKML
AKLWKKVQSKALRSSAPQLIHKDLELLQRIVRDTLAENVDRVLVNSKEGYEKIQEILDVT
APTLKNRVMIKDVKDIFFVYDIPAQMEKALKRKVWLKSGGYLIVDQMEALTAIDVNTGKF
VGTTNLSDTVLKTNLEATVEIARQLRVRNIGGIIIIDFIDMDIPQHKALVLQALENELKK
DKTKTNILGFTQLGLLEMTRKKVGQGLTHVLQKDCPFCEGKGKVLSEESVSLSAKKEILS
VSEYSGAPAILVEANPAVAAYLIGSGGHNLRILEQRTGKRIVIKGVAGMRMEETLIRPAY
DLEEMEKQAVPVEIGQKIKVKVEEPHAGHNFDGIARVEGFVIDIEGGSALLGQEVWVEIT
RIYRTYAKAVVVSAP
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgaagaaacggcagtggctgtggtagaagaccaacaactggtggagatttat
ttggaaaggtccagcaaccagcgcttggctggaaatatcttcaaggggattgtggaaaat
gtcttgcctggcatgcaggccgcctttgtggatattggactggaaaaaaacagttttctc
tatgtggaggaggcggtccctcagcgggtgggggaggatgatgcggacggcgaaccgagg
cactattccattggagaagtgctcaaagaaggacaggagattttagtccaaattgccaaa
gagcccattggcacaaagggagcaagagtgaccacccatttgactttgccgggccggtat
gtggtgctgatgcctaccgttgattatgtggggatctcccggcgcatcgagtccgagccg
gaacgaaagaggctgaaggcgctggcggaacaggtgaaacctgaggggatgggactgatt
gtacgcacggtggcggaaggaatgtcccaggaggaactggccgccgatatcaaaatgctg
gcgaagctgtggaaaaaggtgcagagcaaagccctgcgcagctccgccccccagttgatc
cataaggatctggagctgttgcagcgcattgtccgcgacaccttagcggaaaatgtggac
cgggtgctggtcaattccaaagaagggtacgagaagatacaggaaattttggatgtgacg
gcgcctaccctgaaaaaccgggtcatgatcaaagatgtgaaggatatctttttcgtttac
gatatcccggcgcaaatggaaaaggccttaaaacgcaaggtttggttaaaatcaggggga
tatttgattgtggaccagatggaagccctcaccgccatcgatgtcaatacaggcaaattt
gtcggcaccaccaatctttccgatacggtgctcaaaaccaatctggaggccacggtggaa
attgcccggcagctcagggtgaggaatatcggaggcattattattattgattttatcgac
atggatattccccagcataaagctttggtgctgcaggccctggaaaacgagctcaaaaag
gacaaaaccaaaaccaatatcctggggtttacccagttaggcctgttagaaatgaccagg
aaaaaggtgggtcagggattaacccatgttttgcagaaggattgtcccttttgcgaagga
aaggggaaagtgctttctgaggaaagtgtcagtctttccgccaaaaaagagattctctcc
gtgagtgaatactcgggtgcccccgccattctggtggaggcgaatccggccgtggcggct
tacctgatcggctcagggggacacaatttgcgcatcctggaacagcgcacaggcaaacgg
attgtcattaaaggcgtggcagggatgcgcatggaagaaaccttaattcggcccgcttac
gacctggaagaaatggaaaaacaggccgttccggtggaaataggccaaaagattaaagtg
aaagtggaagaaccccatgccgggcataattttgacggtattgcccgggtggaagggttc
gtcatcgatattgaaggcggcagcgcccttctgggtcaggaggtctgggtggagatcacc
cggatctaccgtacctatgccaaggctgtcgtggtatccgcaccttga
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