Candidatus Formimonas warabiya: DCMF_12945
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Entry
DCMF_12945 CDS
T07208
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa01501
beta-Lactam resistance
fwa02010
ABC transporters
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DCMF_12945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_12945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DCMF_12945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_12945
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
DCMF_12945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Nop5_N
Motif
Other DBs
NCBI-ProteinID:
ATW28588
UniProt:
A0A3G1L1S4
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All DBs
Position
complement(2798587..2800182)
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AA seq
531 aa
AA seq
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MALFSAALFTAGCGSQGKTPETSDNQVVEQKITYNVGAEPETLDPAAATGMVESTIQMAL
FEGLVRLDAKQQPIPGMAERWDISDDGLTYTFHLRDAKWSNGDPVTAHDFEYAWKRLLDP
EMANYYAYQLYYLVNGEEYNAQQAQADDVGVKALDDKTLEVKLKAPTPYFLSLTSFPNLY
PVDQKVVEGNQDWHTAPESLVGNGPFKLVEWDHQQQLVLKKNENYWAADDVKLETLVITT
VESEDTQLTMFDTDQIDIAESLPLPEISRLLEEKKASIYPDLGVYFYAFNTDVEPLGDVR
VRRALSLAINRQNLIDHVTQAFEKPAYALVPYAVVDVNGGDFRQNGGDYFKEDVTEAKRL
LADAGFPDGKGFPALKILYNTSESNQKIAEALQEMWKTNLGISVELTNQEWGVYENSVRV
GDFEIGRAGWTPDYNDAMTYLDMWATSDLPIYYTGWSNPEYDQLIQKAKSGSDLAERSKA
MHDAEAILMKEMPVLPIYFYTNQNLYKPWVKGVIVPTMSSYQEFRWAYVEK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctttattttcagcagctcttttcacggcagggtgcggcagtcagggtaaaactccg
gagacctcagacaatcaggtggtagaacaaaaaattacctataatgtaggtgcggaaccg
gagacccttgatccggcggccgccaccgggatggtggaaagcacgatccaaatggccttg
tttgagggtttggtccggctggatgccaaacagcagcccattcccgggatggccgaaagg
tgggacattagtgatgacggacttacatataccttccatttgagagacgccaagtggagc
aatggtgatcctgtaacggcccatgattttgagtacgcctggaaaagattattggatccg
gaaatggccaattattatgcttaccagttgtattatttagtgaatggagaagaatataac
gcccaacaagcccaggctgatgacgtgggcgtaaaagcgctggacgataaaacgctggaa
gtaaaattaaaagcaccgacgccctatttcttaagcttaacctcctttcccaacctttat
ccggtagatcaaaaagtggtggaagggaatcaagactggcatactgcgcctgaaagtctg
gtgggcaatggtccttttaaactggtggaatgggatcatcagcagcaattagtgctcaaa
aagaatgaaaattattgggcggcggatgatgtgaagcttgagacactggtgatcacgacg
gtggagtcggaggatacccagctgaccatgttcgatacggaccagatcgatattgcagag
tctcttcccctcccagagatcagccgtcttttggaagagaaaaaggccagtatttatcca
gacctgggggtctacttctacgcattcaacacggatgtggaacccctgggggatgtcagg
gtgcgcagagccttgtctttggcgattaaccgccagaacctgattgatcacgtaacccaa
gcttttgaaaaacctgcctatgcgcttgttccctatgcggtggtggatgtaaatggggga
gatttccgccagaacgggggagattactttaaagaagatgttaccgaagcaaaaaggctg
ctggccgacgcaggctttccggacggcaagggcttccctgctctgaaaatcttgtataac
acttcggaatcaaatcaaaagattgcggaagccctgcaagaaatgtggaaaaccaatttg
ggcatttctgtagagctgaccaaccaggaatggggtgtttatgaaaactccgtacgcgta
ggagattttgaaatcggccgggcgggctggaccccggactataatgatgccatgacctat
ttggacatgtgggccacaagtgatttgcccatttattatacaggatggagcaatccggag
tatgatcaattgattcagaaagccaagtccggttctgatcttgccgaacgctccaaagcg
atgcatgatgcagaagccatcttaatgaaagagatgcctgtgctgcccatctatttctac
accaatcaaaatctttataagccttgggtgaagggtgtgattgtcccgaccatgtcctcc
tatcaggagttccgctgggcttatgtagaaaaataa
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