KEGG   Candidatus Formimonas warabiya: DCMF_13115
Entry
DCMF_13115        CDS       T07208                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
fwa  Candidatus Formimonas warabiya
Pathway
fwa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fwa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DCMF_13115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fwa03400]
    DCMF_13115
Enzymes [BR:fwa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     DCMF_13115
DNA repair and recombination proteins [BR:fwa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DCMF_13115
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ATW25572
UniProt: A0A3G1KSW8
LinkDB
Position
complement(2831156..2831713)
AA seq 185 aa
MDLLVLEQQLQKCHRCDLGRRRIKLVFGKGSLTAPVMFIGEGPGEQEDIQGQPFVGKAGQ
LLDKIIAAAGFSENQVYICNVVKCRPPGNRLPNPVEVEACKPFLREQIRSIRPRIIVCLG
ALAAQTLINPDVRITRDRGAWVQKGNFKIMPTFHPAALLRDPAKKRLVWEDMKKVRDEFH
RMREN
NT seq 558 nt   +upstreamnt  +downstreamnt
atggatttgcttgttttggaacagcaactgcaaaaatgtcatcggtgcgatctgggcagg
agacggatcaagctggtttttgggaaaggcagccttacggccccggtgatgtttattggt
gaaggcccgggagaacaagaggatatccagggtcaaccttttgtaggaaaagcagggcaa
ctgcttgataaaattattgctgccgccggcttttcggaaaatcaagtatacatctgcaat
gttgtgaaatgtcgtcctcccggcaacaggctgcccaatcctgtggaagtagaagcctgt
aaaccatttctgcgggaacagataagatcgatccggcccaggatcattgtctgcttaggg
gctttagcggctcagactttgatcaatccggacgtgaggattaccagggacaggggggct
tgggtgcaaaagggtaatttcaagatcatgcccacctttcacccggctgctcttttaaga
gacccagccaaaaagcggctggtttgggaagacatgaaaaaagtccgggacgaatttcac
cgcatgagggaaaattag

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