Candidatus Formimonas warabiya: DCMF_13115
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Entry
DCMF_13115 CDS
T07208
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCMF_13115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_13115
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DCMF_13115
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DCMF_13115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATW25572
UniProt:
A0A3G1KSW8
LinkDB
All DBs
Position
complement(2831156..2831713)
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AA seq
185 aa
AA seq
DB search
MDLLVLEQQLQKCHRCDLGRRRIKLVFGKGSLTAPVMFIGEGPGEQEDIQGQPFVGKAGQ
LLDKIIAAAGFSENQVYICNVVKCRPPGNRLPNPVEVEACKPFLREQIRSIRPRIIVCLG
ALAAQTLINPDVRITRDRGAWVQKGNFKIMPTFHPAALLRDPAKKRLVWEDMKKVRDEFH
RMREN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcttgttttggaacagcaactgcaaaaatgtcatcggtgcgatctgggcagg
agacggatcaagctggtttttgggaaaggcagccttacggccccggtgatgtttattggt
gaaggcccgggagaacaagaggatatccagggtcaaccttttgtaggaaaagcagggcaa
ctgcttgataaaattattgctgccgccggcttttcggaaaatcaagtatacatctgcaat
gttgtgaaatgtcgtcctcccggcaacaggctgcccaatcctgtggaagtagaagcctgt
aaaccatttctgcgggaacagataagatcgatccggcccaggatcattgtctgcttaggg
gctttagcggctcagactttgatcaatccggacgtgaggattaccagggacaggggggct
tgggtgcaaaagggtaatttcaagatcatgcccacctttcacccggctgctcttttaaga
gacccagccaaaaagcggctggtttgggaagacatgaaaaaagtccgggacgaatttcac
cgcatgagggaaaattag
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