Candidatus Formimonas warabiya: DCMF_13300
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Entry
DCMF_13300 CDS
T07208
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_13300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_13300
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DCMF_13300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6164
Motif
Other DBs
NCBI-ProteinID:
ATW25604
UniProt:
A0A3G1KT76
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All DBs
Position
complement(2880305..2881858)
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AA seq
517 aa
AA seq
DB search
MKRKMAFLICVVFIAALLSGCGKQTGETAAPAADREMVVGIPKIATSFDFYNATSGNEGI
SMLQIYDTLVIKDQNGKTAPSLAETYKISPDGKTYTFTLRKGVKFSNGLEFTAADAKFSI
DQARQSVYTSWCYVDVESCDIVDDYTIKLNLKAPNVGFIEYLANCYYSAMVSKETVEKFG
KEYGTSVESSIGTGPYILKEWKPGEECVFAANPDYFLGAPAIKKVRMKTISDVNAAVIAL
QTGDIQAYFNDIPGINYDAVSKMDNLNMVTYPSTILFQTMMNTKTGPFADIRMRLAVAYA
IDREKMLTVGVEGKGAITDYPGNRQGYTEGDPVLKDTWYPVDIEKAKQLVKEAGMEGKAV
TIKTYASDPYPKLATILQDELIQIGLKAEVQQMERTAFLDEVTAKGIYDIAICRWAAGTK
DMDELWYGSFHTDSIGPAGNWSLYSNPEMDQLLEEARAQNDPEARKKIYTEAIKLFDRDV
PIVPLYYPNGSRAYSKDLVIDPGNAEYDRLFSYSWAQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaaatggcattcctaatttgtgtggttttcattgctgccttattgagcgga
tgcggcaaacaaaccggtgaaacggcagctcctgctgcagacagagagatggttgtaggt
attcctaaaatcgcgactagttttgatttttataacgcaaccagcggtaatgaaggcatt
agtatgctgcagatttacgataccttggtgatcaaagaccaaaatggaaaaacagctcct
tcccttgcggaaacgtataagatttccccggacggaaagacctataccttcacattgcgt
aagggcgttaagttttcaaacggactggagtttacggcggcggatgccaaattttccatc
gaccaggcacggcaatcggtatatacttcatggtgctatgtggatgtggaaagctgtgat
atcgtagatgattacaccatcaagctgaacctgaaagcaccgaatgtgggtttcatcgaa
tatttggccaactgttattatagtgccatggtgagcaaagaaacggtagaaaaattcggc
aaggaatacgggacgtcggttgagtcctcaattgggacaggcccttatatccttaaggaa
tggaagccgggggaagagtgtgtttttgcagcgaatcccgactattttctcggcgcaccg
gccatcaaaaaggtccggatgaaaaccatcagcgatgtgaatgcggcggtaattgcgctg
caaacgggagatatccaggcctattttaatgatattcccgggatcaattatgatgcggtg
tccaagatggacaatctgaatatggtcacctatccttcgaccatattatttcaaaccatg
atgaacacgaagaccggaccattcgcggatatccggatgcgcctggccgtagcttatgcc
attgaccgggaaaagatgctcaccgtcggtgtggaagggaaaggagcaataactgattat
ccgggcaatcgtcagggttataccgaaggagaccctgtcttaaaagatacctggtatccc
gtggacatagagaaagccaagcaactggtaaaagaggcaggtatggaaggcaaagcggtc
accattaagacctatgcctctgacccctatcctaaattagccaccattctccaggacgag
ctgatccaaatcggcctgaaagcagaagtgcagcagatggagagaaccgcctttcttgac
gaggtaactgccaagggtatttatgatatcgctatttgccgctgggcggcgggcaccaag
gatatggacgaactctggtatggcagttttcataccgacagtatcggcccggccggcaac
tggagcctatattccaatcctgaaatggatcagctgctggaggaggcgcgggcgcaaaat
gatcccgaggccagaaagaagatctatacggaagcgattaaactctttgaccgggatgtg
ccgatcgttcccctgtattatcccaacggcagccgggcttattccaaagatctggtcatt
gatccggggaatgcggaatacgacaggttattttcgtatagttgggcgcaataa
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