Candidatus Formimonas warabiya: DCMF_15560
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Entry
DCMF_15560 CDS
T07208
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00470
D-Amino acid metabolism
fwa01100
Metabolic pathways
fwa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DCMF_15560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DCMF_15560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fwa01011
]
DCMF_15560
Enzymes [BR:
fwa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
DCMF_15560
Peptidoglycan biosynthesis and degradation proteins [BR:
fwa01011
]
Precursor biosynthesis
Racemase
DCMF_15560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Sfi1_C
Motif
Other DBs
NCBI-ProteinID:
ATW26003
UniProt:
A0A3G1KU16
LinkDB
All DBs
Position
complement(3391577..3392749)
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AA seq
390 aa
AA seq
DB search
MHNFIRWIEVDLDAIINNFREIRKLVPAPVKILAVVKSDAYGHGAVEVAQVLAETGVDMF
AVTTLEEGLELRQHDISTPILVFAPMLPFEVDIMVKSGLIATIDDMGALEALALGAKKQS
IRASFHLKVETGMGRSGLLQEQLSAFLSRLKDLPAIEMSGVYSHLATAMMADKRFAHKQF
AVFSQAVHEIRQAGFSVIAHIANSAAVLDLPEMYLDLVRVGTLLYGQYPSDQVARKITLK
DPWQMKARVISLKQLKPGDSVGYGRDYVAKKALEVGIIPVGYADGFGMVPHTRPVKPYDL
VKSAAKSISNMVGIVPAHFVTRGQERLPVIGRVGMQLSMIDVTGKGIHVGDEVVIPLRRT
TSGARLPRIYVQDGSLKRLRSICRWEDYRI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcataattttattcgctggattgaagtggatttagatgctattattaataattttcgg
gagattagaaaattagttccggcccctgtgaaaattctggccgtggtcaaatccgatgcc
tacgggcatggagctgtggaggtggcccaggttttagcagagacaggagtggatatgttt
gctgtaacaacactggaggagggactggaacttagacagcatgatatttccacaccgatt
ctggtgtttgcccccatgttgccttttgaggtcgacatcatggtcaaatcaggcctaatt
gctacgattgacgacatgggagctttggaggcccttgctttaggggcaaagaaacagagc
atccgggccagctttcacttgaaagtagaaacaggcatgggacgatccggccttttgcag
gagcagctttctgctttcctcagcaggttaaaagatcttcctgccattgaaatgtccggc
gtctattctcatctggccacggcgatgatggcggataagcgttttgcccacaagcagttt
gccgttttcagccaggcggtgcatgaaattagacaagcaggtttttccgttattgcccac
attgccaatagtgcggcggtgctggatctgccggagatgtatttggatctggttcgggtg
ggcactttgctttacggccagtatccgtctgatcaggtggcccggaaaattaccttgaaa
gacccctggcagatgaaggcccgcgtgatctccctgaaacaattaaagccgggagactcg
gtgggatatggccgggattatgtggcaaaaaaggccctggaagtaggcatcattcctgtg
ggatacgcggacggctttggcatggttccccataccaggccggtaaaaccttatgatctt
gtgaaatctgcggcaaaatctatctcaaacatggtgggaattgtcccggctcatttcgtg
actcggggacaagagcgattgcctgttatcggcagggtcggcatgcagttaagtatgatc
gatgtgacaggaaagggaatccatgtgggtgatgaagtggtgattcccttgagacggaca
acctcgggagcccgtttgcccagaatttatgtgcaggatggttccttgaagcggttgcgc
agtatttgccgttgggaagattacagaatttag
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