Candidatus Formimonas warabiya: DCMF_16020
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Entry
DCMF_16020 CDS
T07208
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00020
Citrate cycle (TCA cycle)
fwa00190
Oxidative phosphorylation
fwa00650
Butanoate metabolism
fwa00720
Other carbon fixation pathways
fwa01100
Metabolic pathways
fwa01110
Biosynthesis of secondary metabolites
fwa01120
Microbial metabolism in diverse environments
fwa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCMF_16020
00650 Butanoate metabolism
DCMF_16020
09102 Energy metabolism
00190 Oxidative phosphorylation
DCMF_16020
00720 Other carbon fixation pathways
DCMF_16020
Enzymes [BR:
fwa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DCMF_16020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
HI0933_like
Pyr_redox_2
FAD_binding_3
DAO
FAD_oxidored
NAD_binding_8
NCKAP5
Motif
Other DBs
NCBI-ProteinID:
ATW26079
UniProt:
A0A3G1KPL7
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Position
complement(3495802..3497562)
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AA seq
586 aa
AA seq
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MKKPKIIVVGGGLAGLMATMKIAEKGIPVDLISLVPVKRSHSVCAQGGINAALDTKGEGD
SVWEHFDDTIYGGDFLANQTPVKNMVEAAPGLIYTMDRMGVMFSRTPEGLLDLRLFGGVK
KRRTAFAGATTGQQLLYCCDEQVRKHEAAGLVTKYEGWEFLSAVIDDQGICRGCIAQNLA
TLDIRSFSGDAVILATGGGGLIFGKSTNSVICTGSAAGAVYRQGVCLANMEFIQIHPTAM
LGDDKTRLMSESARGDGGRIWTYKDGQPWYFLEEMYPAYGNLVPRDIAARAIYQVCVEMG
LGIEGQNQVYLDLTHLPADFLTRRLGGILEIYEKFHGDDPKKVPMKIFPGVHYFMGGLHV
AWNHMTCIPGLFASGECDYMYHGANRLGANSLLSALYSGTVSGPAAVKYVTGLNKLGAED
QKALDQEHRRQVEIDDSVKKMHGPENPYQLHQEMGEIMSQNVAIVRHNPALEKTDQVLQE
LNQRWQNINIVDHNEYNNQTILFTKQLKNMMAMARAITLGALIRNESRGSHYKPAYPQRN
DEEFLKTSKSRWTEKGPVIEWEEVDTSHIPPRKRVYNVDKEAAKNG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaaccaaaaatcatcgtcgtggggggcggcctggccggcctcatggccaccatg
aaaatcgccgaaaaagggatacccgtcgatctcatctccctggtgcccgtcaaacggtcc
cactccgtctgtgcccagggcgggatcaacgctgccctcgataccaaaggagaaggagat
tccgtctgggaacactttgacgacaccatctacggaggagacttcctggccaaccaaacc
ccggtcaaaaacatggtagaagccgcccccggcctcatctacaccatggaccgcatgggc
gtcatgttcagccggacgccggaaggactcctcgacctgcgcctcttcggcggggtcaaa
aaaagacgcaccgcctttgccggggccaccaccggacagcagctgctctactgctgcgac
gaacaagtacgcaaacacgaagccgccggcctggtcaccaaatacgaaggatgggaattc
ctctccgccgtcatcgacgaccagggcatctgccgggggtgcatcgcccagaacctggcc
accctggacatccgctcctttagcggcgacgccgtcatcctggccacgggagggggcggc
ctgatcttcggcaaaagcaccaactccgtcatctgcaccggcagcgctgcgggagccgtc
taccggcaaggggtctgcctggccaacatggaattcatccaaatccatcccaccgccatg
ctgggggacgacaaaacccggctcatgtccgaatccgcccggggcgacgggggcaggatc
tggacctacaaagacggccaaccctggtacttcctggaagaaatgtatcccgcttacggc
aacctggtaccaagagacattgccgcccgggccatctaccaggtctgcgtcgaaatgggc
ttaggcatcgaagggcaaaaccaggtctatctcgacctcacccacctgcccgccgacttc
ctcacccggcgcttaggaggcatcctagaaatctacgaaaaattccatggggacgacccc
aaaaaagtacccatgaaaatcttccccggggtgcactacttcatgggcggcctccatgtc
gcctggaaccacatgacctgcatccccggcctcttcgcctccggagaatgcgactacatg
tatcacggcgccaaccgtttaggagccaactccctcttatccgccctctacagcggcacc
gtctccggccccgccgcggtcaaatacgtcaccggcttaaacaaactgggggcagaagat
caaaaagccctggaccaagaacaccggcgccaggtagaaatagacgacagcgtcaaaaaa
atgcacggcccagaaaacccctatcaactgcaccaggaaatgggggaaatcatgtcccag
aacgtagccatcgtccggcacaacccggctctcgaaaaaaccgaccaggtgctccaggaa
ctaaaccaacggtggcaaaacatcaacatcgtcgaccacaacgaatacaacaaccagacc
atcctgttcaccaaacagctgaaaaacatgatggccatggcccgggccatcaccctgggc
gccctaatccggaacgaaagccggggctcccattacaaacccgcttatccccaaagaaac
gacgaagaattcctcaaaacgtccaaatcccggtggactgaaaaagggcccgtcatcgaa
tgggaagaagtagacacctcccacatcccgccccggaaacgggtctacaacgtcgacaag
gaggcggccaaaaatggataa
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