Candidatus Formimonas warabiya: DCMF_16395
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Entry
DCMF_16395 CDS
T07208
Name
(GenBank) spermidine/putrescine ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_16395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_16395
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DCMF_16395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ATW26139
UniProt:
A0A3G1KUK6
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All DBs
Position
complement(3584425..3585306)
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AA seq
293 aa
AA seq
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MGRSSQWTPYLLLLPILVLGFLFFLGIGNALIQSLGYIPAFDMTDFTLQYYQEAFQEPTL
LASIRVSLVIALVSSVLATIFGVLLCAALVLNGKVGGKILQVIKLPILIPHMVVALFVIM
FFSQNGLLARILYALNLLHVQGDFPALLFSTNNTGIIIAYLWKEVPFVAYFVLALMASIN
TTLGEAAENLGASGIKSFFYVTLPLSMPAVHKAFLIIFAFSFGAYELPFLLGATLPKALP
VQAYIEYIDPDLRHRSYAMAMNGVMLLITLAISAVYYLLSGKTNQTSGDRNEI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcatctcaatggaccccctacctgctccttttgcctatactggtactcggc
tttcttttctttttaggtatcggcaatgccttgatccagagtctgggatatattccggcc
tttgatatgactgattttacgcttcagtattatcaagaggccttccaggagccaaccctg
ctcgcctctatccgggtcagtcttgtcattgctctggtttcatccgtactggcaacgata
ttcggcgtgctgctttgcgctgctcttgttttaaacggcaaggtgggggggaaaatcttg
caggtgatcaaactgcctattctgatcccccacatggttgtggccttattcgtgatcatg
ttcttctctcaaaatggcttactggcgcgcattctttatgctttgaaccttctgcatgta
cagggagactttcctgccctcttattcagtacaaacaacacaggtattatcatcgcctat
ctatggaaggaagtcccctttgtcgcttattttgtattggcgttaatggcaagtattaat
accacactgggtgaggccgcggaaaacctgggcgcttcgggaataaaatctttcttttat
gtgaccctgcctctctctatgccggcggtgcataaagcttttttaatcattttcgccttt
tcctttggcgcttatgagctgccctttctgctgggggcaactttaccaaaggccctgccc
gttcaggcctatatcgaatatatcgatcccgatttacgccaccgttcctatgcgatggcg
atgaatggggtaatgctgttaataacactggccatatccgcagtttattatttactgtcc
ggaaagaccaatcaaacaagtggtgaccggaatgagatttaa
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