Candidatus Formimonas warabiya: DCMF_16400
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Entry
DCMF_16400 CDS
T07208
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_16400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_16400
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DCMF_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
DUF7537
Motif
Other DBs
NCBI-ProteinID:
ATW26140
UniProt:
A0A3G1KUN9
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All DBs
Position
complement(3585306..3586544)
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AA seq
412 aa
AA seq
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MIKKVIYLLLVTVGALFILAGCSGGKEDGASKEFDVNTDFDTMIEQAKGTTVSFYGWGGD
EQRNKWLDTTVASALKNKYDITLERVPMDIDQILAKLSGEKQAGQENGSIDMIWINGENF
YSAKENGLLFGPFADKLPNFQKYIDADGAEIQKDFGYPIEGYEAPYGKAQLVLINNSAVT
PETPKNTAELLEYVKKYPGKVTYPALPDFTGSAFVRNVIYDMVGYEQFMDMPADKETVKA
AIEPALAYLRELNPYLWNQGKTFPATSTEVDNMFADGELVLNMSYSPYSVAVSIEKGIYP
DTARSFLFDKGTIGNTNYIAIAANSPHKAAAMAAINEILSAELQATQFSELKALPVVEYS
KLTADEKALFDQVDIGKGTIPQDELLSKRLPEMPAHLVPLIEEIWAEEVVGK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaagtaatttatttactgttggttacagtgggggcattatttatccttgca
ggctgttcgggcgggaaagaagatggggcctccaaagaatttgacgtcaataccgatttt
gacaccatgatcgaacaggcaaagggcacaacggtcagtttttacggatggggcggcgat
gaacagagaaacaaatggctggatactacggtagcttctgctttaaaaaataagtatgac
atcaccctggagcgtgtgcccatggatattgaccagattctggccaagctgtccggcgaa
aaacaggcgggacaggaaaacggctctattgatatgatctggatcaacggggaaaacttc
tattccgccaaagaaaacgggttgctctttgggccttttgccgataagctgcctaatttt
caaaaatacattgacgctgatggggcagaaatccaaaaggattttggttatcccattgag
ggatatgaggccccctatggcaaggcgcagctggttctaatcaataacagcgctgtgacc
cccgaaacaccgaaaaacacggcggagcttctggagtatgtgaaaaaatatccgggaaag
gttacctatcctgctctgccggactttacgggcagtgcttttgtgcgcaatgtcatctat
gatatggtgggctatgaacagttcatggatatgccggccgataaggagacggtcaaagct
gccatcgagccggcattggcttaccttagagagctgaacccctatttgtggaatcaggga
aaaaccttcccggctacttctaccgaggtagataacatgtttgccgacggtgaactggtc
ttgaacatgagttatagcccctattccgttgcggtctcgattgaaaagggtatttatccg
gatacggcccggtcttttctcttcgataaaggcaccatcggcaacacaaactatatcgct
attgccgcaaactcgccgcacaaggcggccgccatggctgcgatcaacgaaatcctttcc
gctgagttgcaggcaacccaattctccgaactgaaggccttgcctgtggtggaatatagc
aaattgacggctgatgaaaaagccttattcgatcaagtggatatcggcaaggggacgatt
cctcaagatgagctcctttccaaaagattaccggaaatgccggcacatttggttccgctc
attgaggaaatctgggcggaagaggtggtaggcaagtaa
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