Candidatus Formimonas warabiya: DCMF_18070
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Entry
DCMF_18070 CDS
T07208
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fwa03032
]
DCMF_18070
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_18070
Enzymes [BR:
fwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DCMF_18070
DNA replication proteins [BR:
fwa03032
]
Prokaryotic type
DNA Topoisomerases
DCMF_18070
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCMF_18070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
XPA_C
Motif
Other DBs
NCBI-ProteinID:
ATW26410
UniProt:
A0A3G1KVH4
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All DBs
Position
3982920..3984830
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AA seq
636 aa
AA seq
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MIDERIETNYDASQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNSIDEALAGYC
DNIIVTIHEDNSITVFDNGRGIPVDIHEKTGKPGVEVALTLLHAGGKFGGNGYKVSGGLH
GVGMSVVNALSEWLEVKVKRNGNVYYQKYERGTPITDLNVIGQEDGTGTEISFKPDEEIF
EELVFNRETLAQRIRELSFLNKGVSITLNDEREGNEVTYKHNGGIIDFVKYLNKNKDVLH
HDPIFFATEKDQVQVEIALQYNDSYTENILSFANNIHTQEGGTHEAGFKTALTRVINDYA
RKLNALKDNQGNLSGEDIREGLTAVISVKVMEPQFEGQTKTKLGNSEVRGIVDSVVGDGM
GTFLEENPAHTRRIIEKTVQAARAREAARKARELTRRKSALESTSLPGKLADCSMKDPAM
SELYLVEGDSAGGSAKQGRDRRTQAILPLRGKILNVEKARLDKILNNEEIRAMITAMGTG
ISDDYDIQKARYHKLIIMTDADVDGSHIRTLLLTFFFRYMRPLIEAGYVYIAQPPLYKVA
VGKEDHYLYSDHELEKFLAQLKKENPSIQRYKGLGEMNPDQLWDTTMNPETRTILRVTLE
DALAADEIFTILMGDKVEPRKEFILTNAKEVRNLDI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgaaagaattgaaacaaattatgatgccagtcagatccaggtattagaaggt
ctagaagccgtgcgaaaacgcccggggatgtatatcggcagtaccagtgcccggggttta
caccatttagtctatgagatagtagacaatagcattgatgaagctttagccggatactgt
gacaatatcattgtgacgattcatgaggataatagtattaccgtgttcgataacggacgg
ggtattcctgtagatattcatgaaaaaaccggcaaaccgggtgtggaggttgctttaacc
ttacttcatgccggaggaaaatttgggggaaacgggtataaggtttccggcggactccac
ggtgtagggatgtccgtagtaaatgctttatccgaatggctggaagtaaaggtaaaacga
aatggaaatgtttactatcaaaagtatgaaagaggtactcccatcacggatttgaatgta
atcggacaagaagacggtaccgggacagaaatatcttttaagccggacgaagaaattttt
gaagaactggtgtttaaccgggagaccttggcccaaagaattcgggaattatctttttta
aataaaggtgtgtccatcactttaaacgatgagagagaaggcaatgaggtaacctataag
cacaacggcggcatcattgattttgtcaagtatttgaataaaaataaagatgtgctgcac
catgatcctattttttttgccacggaaaaagatcaggtccaggtggaaattgccttgcaa
tataacgacagctacacagagaatattctttcttttgccaataatattcatacccaagag
ggaggcacccatgaagccggatttaagacggctttaaccagagtcattaatgattacgcc
aggaaactgaacgcgctaaaagacaaccagggtaatctttccggggaagatatccgggaa
ggtttaactgctgtgatcagcgtgaaggtgatggaacctcaatttgaaggacagaccaag
accaagctgggaaacagtgaggtcaggggcatcgttgattctgtggtgggagacgggatg
ggtacttttttggaggagaacccggcccacacccggagaatcattgaaaaaacggtccag
gcggcccgggcccgggaagcagccagaaaagcccgggaacttacccggagaaaaagtgcc
ctggagagtaccagtctgcccggaaaattggcggattgctctatgaaagatcctgccatg
agcgaattgtatctggtggagggagattctgccggcggctcggccaaacagggacgggac
agaagaacccaggccattcttcctttgcggggaaagatccttaatgtggaaaaagcccgg
ttggacaaaatcctcaataatgaggagatccgggcgatgattacagccatgggcacaggc
atttccgatgactatgatattcaaaaagcccggtatcataagctgattattatgacggat
gcggatgtggacgggtcccatatccggaccttgctcttgactttctttttccggtatatg
aggcctttaatcgaagcaggctacgtctatatcgcccaaccccctttatataaagtcgcg
gtagggaaggaagaccactatttgtattcggatcatgagttggaaaaatttcttgcccag
ctgaaaaaggaaaacccttccattcaaagatataaagggttgggggaaatgaatccggat
cagctttgggatacaacgatgaatccggagaccaggaccatcttgcgcgtgaccctggaa
gacgctttagcggcagatgaaatatttaccatcttgatgggggacaaagtggaaccccgt
aaagagtttattcttaccaatgccaaagaagtaagaaatctggatatataa
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