Candidatus Formimonas warabiya: DCMF_18080
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Entry
DCMF_18080 CDS
T07208
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00750
Vitamin B6 metabolism
fwa01100
Metabolic pathways
fwa01240
Biosynthesis of cofactors
Module
fwa_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DCMF_18080
Enzymes [BR:
fwa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DCMF_18080
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Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
NanE
His_biosynth
NMO
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
ATW26412
UniProt:
A0A3G1KVE2
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Position
3987454..3988338
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AA seq
294 aa
AA seq
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MTATGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVAR
MADPTVIVRILDAVTIPVMAKARIGHFVEAQILEALGIDYIDESEVLTPADDKYHINKHD
FKVPFVCGCRNLGEALRRIGEGAAMIRTKGEPGTGNVVEAVKHMRQVMGEIRWLQNLPAD
ELMTAAKNLGAPYDLVVEVHETGKLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK
SGDPKARAKAIVAAVTHFRDPLVLAEVSKDLGEPMVGIEISTLPVSERMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaacaggtacttggacggtaaaaaaaggtttggcagaaatgctcaagggtggc
gtaatcatggatgtgaccacgccggagcaagcaaagattgccgaagaagcgggagcttgc
gccgtaatggcattggaacgggtgcctgcagatatcagggctgccggcggcgtggcccgg
atggcagaccccacggtaatagtaaggattctggatgctgtaaccattcccgtgatggcg
aaagcccggatcggtcatttcgtggaagcacaaattttagaagccctgggcattgattat
attgatgagagcgaagttttaacaccggcggatgataagtatcatatcaacaagcatgat
tttaaagtgccctttgtgtgcgggtgccgtaatttaggggaagccctgcgccgcattggg
gaaggtgccgccatgatccggaccaaaggagaaccgggcacgggaaatgtggtggaagcg
gtgaaacatatgcgccaggtgatgggagaaatccgctggctgcaaaatcttcccgcggat
gaattgatgacggcggcaaaaaatctgggggcgccttatgatttggtggtggaagtccat
gagacgggaaaattgcccgtggtgaattttgctgccggtggcgtggccacgccggctgat
gctgctttaatgatgcagttaggatcggacggggtttttgtgggatcgggaatctttaaa
tccggcgatccgaaagcgcgggccaaggcaatcgtggctgccgtgacccattttcgtgat
ccccttgtcttggccgaagtctccaaagatttaggagaaccgatggtaggcattgagatt
tccactttgccggtttcggaaagaatgcaggaacggggctggtag
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