Candidatus Formimonas warabiya: DCMF_18980
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Entry
DCMF_18980 CDS
T07208
Name
(GenBank) hypothetical protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00300
Lysine biosynthesis
fwa01100
Metabolic pathways
fwa01120
Microbial metabolism in diverse environments
fwa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCMF_18980
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fwa01002
]
DCMF_18980
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DCMF_18980
Peptidases and inhibitors [BR:
fwa01002
]
Metallo peptidases
Family M20
DCMF_18980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ATW26558
UniProt:
A0A3G1KVP3
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All DBs
Position
4181925..4183352
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AA seq
475 aa
AA seq
DB search
MTDEYDRDVLFRFIDDHAAQMAADVGDLVRVPSVSKDLGQVAEALRLVLSKAAGMGLKAE
SLLDDRVGLVEIGQRQETVGVLAHVDVVDVDGDWTVPPYGGLLVDGEIWGRGAVDDKGPL
VAALYALWAVNSLPLPKYKKVQLIIGTQEEVAWTDMEDYTGRYQTPDYGFTPDGEFPATN
REKGYADIRLDFAKNEEGEKNFEILSLEAGSTVNAIPARAQALVRGEPARMEGFITHYLE
NYPGEKIILEKKENALLITAYGVAAHSSVPEKGKNAITLLCHFLNGLPGKKDGSSRLIAF
IDRFFHGDIYGKAIGLYSQSEYLNGEYIHRNVISPTLLETKEGSFHVTFNLRTSFGTTRE
DIEKAFAAFAQQYHYTWTHLSYYEPIYVSKDMPFLKVLGEAYEEITGLCSEPALAHGTSY
AKAMPNTVAWGPVFPGQEDFCHGADERISLASLVTAAKIYARALADLVFSPNSFK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgaatatgatcgggacgtccttttccgctttattgacgatcatgcggcgcaa
atggcggcggatgtcggggatctggtgcgggtgcccagtgtgtccaaagatctgggccag
gtggcggaagcattgcgtttggtcttgagcaaagcagccggtatgggcttaaaagcagaa
tccctgctggatgaccgggtggggctggtggaaataggccaaagacaagagacggtcggt
gtgctcgcccatgtggatgtagtggacgtggacggggattggaccgttcccccctatgga
ggcctcctggtggacggggagatatgggggcggggggcggtagacgacaaggggccgttg
gtggctgccctttacgctttatgggccgtaaacagcctgcccttacccaaatacaaaaaa
gtgcaattgattatcggcacccaggaagaagtagcctggaccgacatggaggactatacg
ggaagatatcaaacaccggattacggttttacaccggatggagaatttcccgccaccaac
cgggaaaaggggtatgccgatatccggcttgattttgccaaaaacgaggaaggggagaag
aatttcgagatcttaagcctggaggcggggagtacggtaaatgccattccggcccgggcc
caggctctggtccggggagaacctgcccgcatggaaggatttatcacccattatctggaa
aattaccctggagaaaaaataattctggagaaaaaagaaaatgcccttctcattaccgct
tacggggttgccgcccattcctctgttccggaaaaaggaaagaatgccattaccctgctc
tgccattttttaaacggtcttcccgggaaaaaagacggctcctcccggctgattgccttc
atcgaccgctttttccacggggacatctacgggaaggccatcggcctgtacagccaaagc
gaatatttgaacggggagtacattcatcgcaatgtgatttcacccaccctgctggaaacg
aaagaggggagctttcatgttacctttaacctgagaacctccttcggcaccaccagggaa
gatattgaaaaggcctttgcggcctttgcacagcaatatcactatacctggacccacttg
agctattatgagccgatttatgtcagcaaggacatgccttttctcaaagtcttaggagaa
gcctatgaggagatcacgggcctgtgcagcgaaccggccctggcccacggcacctcttat
gccaaggcgatgcccaataccgtggcttgggggcctgttttccccggtcaggaagatttc
tgtcacggggcggacgaaagaatctccctggcatctctggtgacagcggccaaaatctat
gccagggctttggcggacctggtcttttccccaaattcgtttaaataa
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