Candidatus Formimonas warabiya: DCMF_21480
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Entry
DCMF_21480 CDS
T07208
Name
(GenBank) integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fwa03032
]
DCMF_21480
03036 Chromosome and associated proteins [BR:
fwa03036
]
DCMF_21480
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_21480
DNA replication proteins [BR:
fwa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DCMF_21480
Chromosome and associated proteins [BR:
fwa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DCMF_21480
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DCMF_21480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ATW26991
UniProt:
A0A3G1KX25
LinkDB
All DBs
Position
4742124..4742399
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTDLINSVAEKAEVTKKDAEKVINAVFASISDALTAGEKVQLVGFGTFEVKERAARVG
RNPQTGETINISAAKVPTFKAGKVLKDAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaaccgacctgataaatagcgtagcagaaaaagctgaagtaacaaaaaaagat
gcagaaaaagtcatcaacgccgtgtttgcaagtattagtgatgccttgacggcaggggaa
aaagtacaacttgtgggatttggtacttttgaagttaaggaacgggcggcccgtgtaggt
cggaatccccaaaccggagaaaccataaatatttccgctgcaaaagttcccacttttaaa
gccggcaaagttttaaaagatgcggtggctaagtaa
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