Candidatus Formimonas warabiya: DCMF_21975
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Entry
DCMF_21975 CDS
T07208
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DCMF_21975
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fwa01007
]
DCMF_21975
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fwa03016
]
DCMF_21975
Enzymes [BR:
fwa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DCMF_21975
Amino acid related enzymes [BR:
fwa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DCMF_21975
Transfer RNA biogenesis [BR:
fwa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DCMF_21975
Prokaryotic type
Other AARSs
DCMF_21975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ATW28814
UniProt:
A0A3G1L2D7
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All DBs
Position
4845417..4846874
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AA seq
485 aa
AA seq
DB search
MDFNDQMVVRRKKMDELREMGIDPFGAKFERTSTSKEIISRFEEMEQQKVVIAGRIMAVR
EHGKVSFAQLQDNEGQIQIYVRLDDVGEEQFQIFKKVDIGDIIGVDGFVFRTKRGEISVH
VEKLTFLTKSLRPLPEKWHGLKDVELRYRQRYVDLIVNPEVKRVFELRSKIIRSMRRYLD
GRGFLEVETPTMHAIPGGASARPFITHHNALDIDLYMRIALELHLKRLIVGGMEKVYEIG
RVFRNEGISIKHNPEFTMMELYWAYADYHDMMEITENVVAHIAREVLGSTKISYQGEEID
LTPPWTRISMIDAITKYSGKDFGTIKTDEEARGAAEEIGVHVDRDATKGDVINAVFEEKV
EGHLLQPTFIIDYPIEISPLAKRKSDDPSLTYRFEAFVYSRELANAFTELNDPLDQAERF
RDQVKRRDAGDDEAQMMDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVILFPT
LRPRD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttggattttaatgaccaaatggtggtccgccggaagaaaatggacgagcttcgggagatg
gggattgatccttttggggcaaaatttgagcggacgagtacatcaaaagagattatttct
cgctttgaagaaatggagcagcaaaaagtagtcattgcgggccggattatggctgttcgg
gaacacggcaaggttagctttgcccagttgcaggacaatgagggccaaattcagatttat
gtccgtctggatgatgtgggggaagagcaatttcagatttttaagaaggtggatatcgga
gatattattggagtggacgggtttgtttttcgtaccaaacgaggggaaatttccgtgcac
gtagagaaattgacttttctcaccaagagcctgagaccccttccggaaaaatggcatgga
ttaaaagatgtggaactgcgttatcggcaaaggtatgtggatctcattgtaaatcccgaa
gtaaaacgggtctttgaattacgcagtaaaattatccggtctatgagacggtatttggac
ggccggggctttttagaggtagagacgcccaccatgcacgccattcctggaggagcatcg
gcccggccctttattacgcaccacaatgccttggatattgatttatatatgcgcattgct
ttggaactgcatttaaagcgtttaattgtcggcggcatggaaaaggtttatgaaatcggc
cgggtatttcgtaatgaagggatttctattaaacacaaccccgaatttaccatgatggaa
ctctactgggcatacgccgattatcacgatatgatggaaattaccgagaatgtagtcgcc
catattgcccgtgaggtattagggtcgacgaaaatttcttatcagggagaagagattgac
cttaccccgccctggacgcgcatcagcatgatcgatgccattaccaaatactcgggaaaa
gactttggtaccatcaaaacggatgaagaagccagaggggccgcggaggagattggcgta
cacgttgacagagacgccacaaaaggggatgtgatcaatgcggtctttgaagaaaaagta
gaagggcatttgctccagcccacatttattatcgattatcccatagaaatatccccattg
gcgaagcgtaaaagtgatgatcccagtttgacctatcggtttgaagcctttgtttattcg
agagagctggctaatgcttttaccgaattgaatgacccgctagatcaagcggaacgtttc
cgggaccaggtgaagagaagagatgcgggtgatgatgaagcgcaaatgatggatgaagat
tttgtacgggctttggaatacggcatgccccctaccggtggcttgggaattggcatcgac
cgcctggtgatgctgttaacggattctccgtccatccgggatgtgattcttttcccgaca
ttacgtcccagagactaa
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