Candidatus Formimonas warabiya: DCMF_22030
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Entry
DCMF_22030 CDS
T07208
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_22030
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DCMF_22030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
nSTAND_NTPase5
AAA_16
AAA_22
AAA
NACHT
ABC_tran
nSTAND3
SLFN-g3_helicase
AAA_14
DUF7125
NTPase_1
ArsA_ATPase
AAA_24
Zn_ribbon_8
NB-ARC
NPHP3_N
AAA_5
RNA_helicase
DUF7129
ATPase_2
zf-RING_10
GvpD_P-loop
Zeta_toxin
DZR
TackOD1
zf-RING_4
Motif
Other DBs
NCBI-ProteinID:
ATW27075
UniProt:
A0A3G1KXY5
LinkDB
All DBs
Position
4858325..4859689
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AA seq
454 aa
AA seq
DB search
MSKNKTIYVCRECGHDSVKWQGRCPGCGAWNTLEEEVISTKRSPLSGLGENPASSKPQPI
SEVEVKDADRLVLDNEELRGVLGGGIVPGSLILVGGEPGIGKSTLLMQVAYEIAQKYGKV
LYVSGEESAHQVRIRAERLGTLSPRVLVLTETNMEQIMDHAKKEKPVLTVIDSIQTVFLP
DLSAAPGSVSQVRQCAAEGMRFAKTHNLALILVGHVTKEGMLAGPRVLEHMVDTVLYFEG
ERHHSFRLLRAIKNRFGSTNEIAVFDMQHQGLIPFTNLSQLFLAQRPEGVSGSVVVCAMQ
GTRPVLLELQALASSTAFGNPRRLTSGVDYNRTLIILAVLEKIVGMNLSSQDVYVNIAGG
VRVEDPAVDLAIAVAVASSFRDREIDGHTVVMGEIGLGGEVRAVTNLERRLKEAVKMGFK
KAVIPKGNKVGDDINLNVVPVTSVAEALEVVMER
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaagaacaaaacaatttatgtgtgccgggagtgtggccacgattctgtgaaatgg
cagggacgctgcccggggtgcggcgcgtggaacaccctggaagaagaagtcatcagcact
aaaaggtcccccctttcggggctgggggaaaatccggcttcttctaaaccccagcccatc
agcgaagtagaagtgaaggatgccgacaggctggtccttgataacgaagaattaagaggc
gttctgggcggaggcattgttccgggttccttaatcctggtaggaggggaaccgggcatt
ggcaaatcgacccttttaatgcaggttgcctatgaaattgcccagaaatacggcaaggta
ctgtatgtttccggagaggaatctgcccatcaggtaaggatacgggcagagcgtttgggg
accctttccccccgggtgctggttttaacggaaaccaatatggaacaaatcatggaccat
gccaaaaaagaaaaaccggtattaaccgtgattgacagcatccaaacggtttttttgccc
gacttgtccgccgcaccgggcagtgtctcccaggtccggcagtgtgctgccgaagggatg
cgttttgccaaaacccataatctggccttgattttggtgggccatgtcacaaaagaggga
atgctggccggcccccgggttttagagcatatggtggatacggttttgtattttgaagga
gaacgtcatcattcttttcgcctcttgcgggcgatcaagaacagattcggctcaaccaat
gagattgctgtttttgatatgcagcaccagggcttgatccctttcaccaacctgtctcag
ttgtttttagcccagcggccggaaggggtgtccggatctgttgttgtttgcgccatgcag
ggaaccagacctgtgttactggaattacaggctttagcctcatctacggcttttggaaat
ccccgccggctcacctcaggggttgattacaaccgcaccttaattattctggccgtactg
gagaaaatcgtcggcatgaatctgagcagtcaggatgtttacgtaaatattgccggcggt
gtgcgggtggaagatcctgccgttgacctggcgattgctgtggccgtggcatccagtttc
cgggaccgggaaattgacggccatactgtggtgatgggggagattggcttaggaggagag
gtaagggcggtgacgaatttggagcgcaggctcaaagaggcggtaaaaatgggatttaag
aaagcggtaattccgaaagggaacaaggtaggggatgacattaatcttaatgtggtaccg
gtaactagtgtggcggaggctttagaagtggtcatggaaaggtga
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