Candidatus Formimonas warabiya: DCMF_22160
Help
Entry
DCMF_22160 CDS
T07208
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DCMF_22160
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fwa01007
]
DCMF_22160
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fwa03016
]
DCMF_22160
Enzymes [BR:
fwa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
DCMF_22160
Amino acid related enzymes [BR:
fwa01007
]
Aminoacyl-tRNA synthetase
Class I (G)
DCMF_22160
Transfer RNA biogenesis [BR:
fwa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DCMF_22160
Prokaryotic type
DCMF_22160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
CysS_C
tRNA-synt_1f
PutA_1st
Motif
Other DBs
NCBI-ProteinID:
ATW27095
UniProt:
A0A3G1KY03
LinkDB
All DBs
Position
4880831..4882294
Genome browser
AA seq
487 aa
AA seq
DB search
MAVKVFNTLTKKKEELVTRDPGKVSMYVCGPTTYNYIHLGNARPLVAFDTVRRYLKYRGY
DVTYVQNFTDVDDKIINRSREEGESPAALAQKYINAYFEDADALNVLRADVHPRVTDHMG
EIIQMVQGIMEKGLAYEVGGNVYFDVRKFFGYGKLSGRDLDEMKAGARVDVGEEKQDPLD
FALWKAAKPGEPSWDSPWGQGRPGWHIECSAMSLKYLGPGFDIHGGGADLIFPHHENEIA
QTEAFSGQQFVRYWLHNGFITVNEEKMSKSLGNFFLLRDILARFSPDVIRFYLLSTHYRS
PLDFDDQKLHVAEKGLERIRTSLRLVEDTLRMCKKSPDQGQAGAAGELQQKLDAIKAAFI
EAMDDDFNTSLAIAAVFDLSREANSFINDSSFKPGKAAVPVLEKALGIFHEFHEVLGMIE
PNRPAGIQDQGMDEKLMEIIIDIRQEARKKKDWATADAIRDRLKAAGIILEDTPHGVRWK
KIDGAHE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcaaagtatttaataccttgacgaaaaagaaagaggaattagtgacccgggac
cccggcaaagtgagcatgtatgtgtgcgggccgaccacctataattatatccacctgggc
aatgcccgccccctggtggcttttgatacagtaagacgctatctgaaataccggggttac
gatgtcacatacgtacagaattttaccgatgtggacgataagattattaataggtcccgg
gaagaaggggaaagtccggcggcattagcccaaaaatatattaacgcctattttgaggat
gcggatgccttaaatgtcttaagggcggatgtacatccccgggtgacggatcatatgggt
gaaatcattcaaatggtacaggggattatggagaagggcctggcttatgaagtgggggga
aacgtctactttgatgtgcgcaagttcttcggatacggcaagctgtccgggcgggacctg
gacgagatgaaagcgggggccagggtagatgtaggggaggaaaaacaggatcctctggat
tttgccctgtggaaagcggccaaacctggggagcccagttgggatagcccctggggccag
ggacggccggggtggcatattgaatgttccgccatgtctttaaaatatttgggccctggt
ttcgatattcacgggggaggagcagacctgattttcccccaccatgaaaatgaaatcgct
caaacagaggctttttccggacagcagtttgtgcgctactggctgcacaacggctttatt
acggtaaacgaagaaaaaatgtctaaatctttggggaattttttcttgctcagggatatc
ctggccaggttctccccggacgtgatccggttttatcttctttccacccactatcgcagc
cctttggattttgacgaccaaaagctgcacgtggcggaaaagggtctggaacggatccgt
acctctttgaggctggtggaggatactttaaggatgtgtaagaaatccccggatcaggga
caagccggagcggcaggagaattgcagcagaagctggatgccattaaggctgctttcatt
gaagctatggatgatgattttaacacttccctggctattgccgcggtatttgatttgagc
cgggaggcaaacagttttattaatgacagcagttttaagccgggaaaagctgcggtgccg
gtgctggaaaaggccctcggtatttttcatgaatttcatgaggtattggggatgattgaa
ccaaatagaccggcaggaatacaagatcaaggtatggatgaaaagttaatggaaataatt
atcgatatcaggcaagaggcccggaaaaagaaggattgggctaccgccgacgccatccgg
gaccggctgaaagcagcgggaatcatcctggaagatacgccccatggtgtgcgctggaaa
aagattgatggtgcccatgaatag
DBGET
integrated database retrieval system
