Candidatus Formimonas warabiya: DCMF_22475
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Entry
DCMF_22475 CDS
T07208
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fwa03016
]
DCMF_22475
Enzymes [BR:
fwa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DCMF_22475
Transfer RNA biogenesis [BR:
fwa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DCMF_22475
Prokaryotic type
DCMF_22475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ATW27144
UniProt:
A0A3G1KXD7
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All DBs
Position
4924607..4925350
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AA seq
247 aa
AA seq
DB search
MTRNIKLLIEYEGTNYVGWQKQPESHGKSIQGLLEDSLRTMVQHEVHLTAAGRTDAGVHA
QGQVANFFTPSAIPAERFPPGLKGLLPADIVVKGAWEVPEQFHARYSALRKTYRYTIRTA
RAPSAFEWRYSLHLPIPLNVEAMKTGAGFFLGTHDFTSFCAKGSPAKKFIRTVHACRISS
DQEHIYFEVTADGFLYNMVRIMVGTLVNVGRGRWAPEHVKTIIEAKNRNLAGPTAEPQGL
MLCEVNY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaaatattaagctcctcatcgaatatgaggggaccaattatgtagggtggcag
aaacagccggaaagccacggaaaaagtattcaaggactattagaagatagtttacgcacc
atggtccagcatgaggtacacttaactgctgccgggcgtaccgatgcaggcgttcacgcc
cagggccaggtggcgaatttttttaccccgagcgccattcctgcggagagatttccccct
ggactgaagggattgcttcccgcagatatcgtggtaaagggggcctgggaggtgccggag
cagtttcatgcccggtatagtgcgcttagaaagacctatcgctataccattcgaacggca
agggcaccgagtgcttttgaatggcggtatagtctgcatctgcccataccgttaaatgtg
gaggcgatgaaaacgggggccggttttttcctgggaacccatgatttcacttcattttgc
gccaaaggcagtccggcaaaaaaatttatcagaacggtccatgcctgccggatatcttct
gatcaagagcacatttattttgaggttacggcagatggcttcctatacaacatggtgcgc
attatggtaggtaccttagtgaatgtgggccggggcagatgggccccggagcacgtaaaa
acgatcatagaagccaaaaatagaaatctggccggaccgacggccgaaccgcagggattg
atgctctgtgaggtaaactattag
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