Candidatus Formimonas warabiya: DCMF_25100
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Entry
DCMF_25100 CDS
T07208
Name
(GenBank) cobalamin biosynthesis protein CbiM
KO
K02007
cobalt/nickel transport system permease protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DCMF_25100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_25100
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalt transporter
DCMF_25100
Nickel transporter
DCMF_25100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CbiM
PDGLE
Myc_target_1
Motif
Other DBs
NCBI-ProteinID:
ATW27594
UniProt:
A0A3G1KYM8
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All DBs
Position
5554671..5555717
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AA seq
348 aa
AA seq
DB search
MHIPDGYLSPQTCLTLGAAMIPVWATAATKLKKTLKEKQVPLLAIGAAFSFTIMMYNVPI
PDGTTAHAVGATLMAITLGPWAATVGVTIALIIQAFFFGDGGILAIGANTFNMAFVMPLV
GYYIYRLISGNSEVTSSRRVVAAVIAGYVSINIAALVAGFEFGIQPTLFHAADGTPLYAP
YTLGQALPAMAFAHMLIAGPIEGVVTGLVVKYLQSANPGLLQMYPVRTSTDAAPGTAPSY
KKLWYGLIGLMIFAPLGLLASGTAWGEWSGEEMQGLLGFIPQGMAKYADIWTAALPDYSI
PGFEGTFMQSALAYIVSAIVGLLLILLITSLIGWWQKRNVKSTQPASK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcatattccggacggatatttaagtccgcagacttgtttaacactgggcgcggcaatg
attcccgtatgggcgactgctgctaccaaactaaaaaagaccttaaaggaaaaacaggtg
ccccttttggctatcggagcggcattttcttttaccattatgatgtataacgtgccgatc
ccggacggcacaacggcccacgccgtaggcgccaccttaatggcgatcacgttgggacct
tgggcggcaacagtgggtgtgaccatcgcacttattattcaagcttttttctttggggat
ggcgggattctggccatcggcgcaaacactttcaatatggcatttgtcatgcccctggtg
ggctattatatttaccgtctcatatccggcaattcagaggtgacttcaagccggagagtt
gtcgcggctgtgattgccggatatgtgtccatcaatatcgccgcattagtggccggtttt
gaatttggcattcaaccgaccctgtttcatgccgccgacggcactcccctatacgcccct
tataccctaggtcaggctttgcccgcgatggcttttgcccatatgctgattgccggcccc
atcgaaggggttgtgaccggacttgtcgtcaaatatttgcaaagtgccaatcccggctta
ttgcaaatgtatcctgtccggacctcaacagatgctgctccagggactgctccgagttat
aaaaaattgtggtatggcctgattggattgatgatctttgctcctctgggtttgctggct
tccggaacagcctggggtgaatggtcgggggaagaaatgcaaggtttattagggtttatt
cctcaagggatggccaaatatgcggatatctggacggcggcgttgcccgattactccatc
cccggttttgagggaacctttatgcaatctgcgttagcctatattgtctcagccattgtg
ggactcctcttaattctgcttattacttcgctgatcggctggtggcaaaaaagaaatgtg
aagagtacgcaacccgccagtaagtag
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