Candidatus Formimonas warabiya: DCMF_25240
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Entry
DCMF_25240 CDS
T07208
Name
(GenBank) hypothetical protein
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fwa03000
]
DCMF_25240
Transcription factors [BR:
fwa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DCMF_25240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_DeoR
HTH_11
WHD_RNase_R
HTH_Crp_2
RepL
HTH_24
HTH_28
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ATW27618
UniProt:
A0A3G1KYR2
LinkDB
All DBs
Position
5585300..5586019
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AA seq
239 aa
AA seq
DB search
MIGSKNTPLYKECANILRKQILEGKWEEGDCLPSEKEFSAEFGVSRITIRQCMKLLEEEG
LIIRQAGRGTFIPEKPIEQGLAGFHNFAKNTSKEGHKAGFVIENIQISLPSKHTAKALNV
NENEQVYKIERIKLRDDRPLMHERIYLPRKLIPGLGLDELSQEWLSDLLAKNNIHITRVK
YSIEPFLIDDYEAKKLLVHSGLLGLLIDRVSWAGDEVVMFTRSIVRTDLVKYTIETSKN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgattggaagcaaaaataccccattatacaaggaatgcgcaaacattttacggaaacag
attttagaaggaaaatgggaagagggagattgtctgccctcagaaaaagaattttccgcg
gaatttggcgtttccagaattaccattcgacagtgcatgaaattgctggaagaggaaggt
ctgatcattagacaggcgggcagaggaacctttattccggaaaaaccaattgaacagggc
ctagcgggtttccataactttgccaaaaacacgagcaaagaagggcacaaagcaggattt
gtcatcgaaaatattcagatcagtttacccagcaaacacacggcaaaggcgttaaatgtg
aacgagaatgaacaggtgtataaaatagaaagaattaagttaagagacgacaggcctctg
atgcatgaaaggatttatttgccccgaaaactgattcccggtctcggactggatgaattg
tcccaggaatggctgagcgatctgcttgccaaaaataatattcacattacgcgcgtcaag
tattccatcgagccttttttaatcgacgactatgaggcgaaaaaattattggttcattcc
ggattattggggcttttaatagaccgggtgagctgggccggtgatgaagtggtcatgttt
acccggtccatcgtcagaacggatctggtaaaatataccattgagacttcaaagaattga
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