Candidatus Formimonas warabiya: DCMF_25290
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Entry
DCMF_25290 CDS
T07208
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_25290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_25290
Transporters [BR:
fwa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DCMF_25290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Septin
Pam3_gp59
Motif
Other DBs
NCBI-ProteinID:
ATW28897
UniProt:
A0A3G1L2L2
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All DBs
Position
5595518..5597143
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AA seq
541 aa
AA seq
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MRKKSFITMMAFLICASLILAGCSKSNSPVSNPEEEKEKEVVVAIYRDGAMEELDAATYN
GPHFLYKMIYEGFVEDGGNGQILPRLATSWDISQDGKTYTFKLRKGVKFSDGTDFNADAV
IFNLKRWVNNDRHSVLTSVNVESMEAVDNDTVKIVFKNGAYPILTELTYPRPVRFLSPAS
ITEVPGDVMGKFTKPVGTGPWMLESYTKDQEFTLVPNPYYWGEKPKVDRITFKVITDGQA
RVLALQSGEVDILGGDLIGKIPMESFLELKNSGAFETFTKGTMCSHFIAFNQDVAAFQDK
NVRLAMNYAINKKSIAENLFDNLGLEANGLYQTGVPYTTPENNYGFSNDKEKAKQLLEGA
GYTDTNGDGIREKDGKNLEFNFMLSTEEFPEWKPLAEFVQSEFAAVGIKVNLNILDKNGY
EDATMNTKAFDIVLMRTSSDSWVPHGSLLEMFTILSTSNAAKVWYDEGLYNNIIKTLNTV
DETERQKNYDTVFKFISEEALTIPIYYPITSFAVNTDKIAGFEIGVNNYAPIEWQKLDVK
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaagtcttttataaccatgatggcatttttaatttgtgcctctttaatcctt
gccggctgcagcaaaagcaattccccggtaagcaatccggaagaagagaaagaaaaggaa
gttgtggtggcgatctatcgggacggggcgatggaggaattggatgccgccacctataac
ggtccccacttcttatacaagatgatctatgagggttttgtggaagacgggggaaacgga
cagatcctgccccggctggccacaagctgggatatttctcaggacggcaaaacatatacc
tttaagctccgtaaaggggtaaaattctccgacggcaccgatttcaatgcggacgctgtg
atctttaacctgaaaagatgggtcaacaacgaccgccattccgtcctgacatcggtcaat
gtagagagcatggaagcggttgataacgatacggtaaaaattgtctttaaaaacggggcc
tatcccatattgaccgagctgacctatcccaggccggtgcgcttcttaagccctgcttcc
atcacggaggttcccggggatgtgatgggcaaattcaccaagcccgtgggtaccggacca
tggatgctggaatcctatacgaaggatcaggaatttaccctggtgcctaacccgtattac
tggggggaaaaaccgaaggtggatcgcatcacatttaaggtaataacggacggacaagcg
agagttttagcgctgcaaagcggcgaggtggatattctgggcggggacctgatcggaaaa
attcccatggagagctttttagagctaaaaaactccggcgcctttgaaacatttaccaaa
gggaccatgtgctcccattttattgccttcaaccaggatgtggcggcattccaagataaa
aatgtccgtttggccatgaactatgccatcaacaaaaagagcattgcagaaaatttgttc
gacaacttgggtttagaagccaatggtttgtatcaaacaggggttccttatactacgccg
gaaaacaattacgggttttccaatgataaggagaaagcgaaacaattacttgaaggggcc
ggatacacagataccaatggcgacggcatccgcgaaaaagacgggaaaaatctggagttt
aactttatgttgtccacggaagaattccctgaatggaagccgctggcggagttcgtgcaa
tctgaatttgccgctgtgggcatcaaagtgaatctcaacattttggataaaaacggctac
gaagacgccaccatgaatacaaaggcatttgacattgtgctgatgagaacctcttcggat
tcctgggtgccccacggttccctgctggagatgtttacaattctctctaccagcaatgcc
gcaaaggtatggtatgacgaagggctgtacaacaacattatcaaaacattaaacaccgtt
gacgaaacagaaaggcaaaagaattacgatacggtattcaaatttatcagcgaagaagcc
ctcaccattcccatctattatcccatcacttcttttgctgtcaacacggataaaatagca
ggatttgaaatcggcgtgaataactatgcgcccatcgaatggcagaagctggatgtaaaa
gaataa
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