Candidatus Formimonas warabiya: DCMF_25960
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Entry
DCMF_25960 CDS
T07208
Name
(GenBank) CarD family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02020
Two-component system
fwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCMF_25960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCMF_25960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fwa03000
]
DCMF_25960
Transcription factors [BR:
fwa03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
DCMF_25960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RVT_1
Motif
Other DBs
NCBI-ProteinID:
ATW27740
UniProt:
A0A3G1KZA5
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Position
5749870..5750553
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AA seq
227 aa
AA seq
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MYRPKCMMDLEIFSGLNREEKERVCHLTRKNVYEKNEFVFLEGETADAIYVIKYGKVKLL
KVSENGREVILDILKEDDIFGENTFFDDAVHTISAQALEKTVVCSCYKDDFSVLLQNPKT
SLKIIQLLSSKINNYTEQVASNAFQDVKGRIAATLLRLAKTYGQSNGIRTTIDIDLTHQD
LANLVNASRVMVTNVLLDLRQSSLVTTEGHKIILLDQNKLAEAARAI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtacagacccaaatgtatgatggatttggagattttttccggtctgaacagagaagaa
aaagaaagagtatgccatttgacccgaaagaacgtttatgaaaagaatgagtttgttttt
ctggaaggcgagactgccgacgctatttacgtgatcaagtacgggaaggtaaagctgctc
aaagtatcggaaaacggccgggaagttattttggatatcctgaaagaggatgatattttt
ggggagaacacttttttcgacgatgccgtgcacaccatctcggctcaagccttggagaaa
acggtggtttgctcttgctataaagacgacttttctgttttgctccaaaatcctaaaaca
tccttgaaaattatccagttattaagcagcaagatcaacaattataccgagcaggtggcc
agcaacgcctttcaggatgtgaaaggaagaatcgccgccacacttttgcgcctggcaaaa
acctatggccaatccaatgggatcaggaccactattgatattgatctcacccatcaggac
ttggctaacctggtaaatgcttcccgggtgatggtgacaaatgttctcttggacctcagg
caatcctcccttgttaccaccgaaggacataaaattatattgctggatcaaaataaactt
gctgaagctgcacgagccatatag
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