Candidatus Formimonas warabiya: DCMF_26830
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Entry
DCMF_26830 CDS
T07208
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fwa03000
]
DCMF_26830
Transcription factors [BR:
fwa03000
]
Prokaryotic type
Helix-turn-helix
Other families
DCMF_26830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_4
HTH_30
PAS
AAA_5
PAS_9
Mg_chelatase
HTH_50
HTH_28
AAA_2
AAA
PAS_8
AAA_16
AAA_19
HTH_29
DUF2089
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATW27889
UniProt:
A0A3G1KZS5
LinkDB
All DBs
Position
5953669..5955123
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AA seq
484 aa
AA seq
DB search
MKTRFNEIINQYPFFPDILDNIDVAVYFCDVNGRLLYINKVAERLDGYTNKELYGRTVGE
AYGLDEKTSPMLMALTTEKPVVDKPFRYNVNGREVYQICNARSVFFEGKKVGAYTIQKDV
TQLMEVIEQNISLQKKIFLPNADNSVESHKDIMGIDRLIGEHYLFKECKEMAIRAARSDS
PILLTGETGSGKELFARCIHENSKRKEGPFLAINCAAIPETLLESILFGTSKGIYTGAVE
RKGLFEEAEGGTLFLDEINSMPLFSQSKLLRTLEEKEIQHLGSKERIKINTRIISSSNVS
PQDAISKEQIREDLFYRLAVVHIVIPNLASRKSDIFLLTNHFITLFNERFQKQIIGLDDE
VLRFFLDFSWPGNVRQLKHCLEAAMNLVTDEDRKIGWKHLPAYLLSGNNVTTGGYRQKET
IVKPINNEYSKPDSIDVFSYILEKEKEEIIKALMENHGNVSKTAKQLGMHRQSLIYRIKK
YNIK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccagattcaatgagatcataaatcaatatccgttttttcccgatatcttagat
aacattgatgtggccgtatacttttgtgatgttaatggccgtctgctctatatcaataaa
gtggcagagcggctggatgggtataccaacaaagaactttatggtcgcaccgtaggagag
gcctatggcttagatgagaaaacaagcccgatgttaatggcattgactacggaaaaacct
gtggtggataaaccttttcgctataatgttaatgggcgggaggtttatcagatttgtaat
gctcgttccgttttttttgaggggaaaaaagtgggggcatataccatccaaaaagatgtg
acccagctaatggaggttatagaacaaaatatcagccttcaaaaaaaaatatttttgcca
aatgcggataattccgtggaatctcacaaagatatcatgggtattgaccgtcttattggg
gagcattatctttttaaggaatgcaaggaaatggcgataagggcggcaagaagcgattcc
ccaattcttctcaccggagaaacgggtagcggcaaagaactatttgcgcgctgcattcat
gaaaatagtaagagaaaagaaggtccatttctcgcaataaattgtgcagctattccggaa
accttgctggagagcattctctttggtacttccaagggtatctatacaggggcagtggaa
cggaaaggtctttttgaagaggctgaaggtggtacgttgtttttggacgaaatcaattcc
atgcctctcttttcccagtcgaagctgcttcggactttggaggaaaaagaaattcaacat
cttgggagtaaagagcgaatcaagatcaatactcgtattatcagcagcagcaatgtttct
ccgcaggatgcaatcagcaaagaacagatccgggaagaccttttttatcgattggcagta
gtgcatatcgtcatccctaatttggctagtcgcaaaagcgacatattcttactaaccaac
cattttattacactttttaacgagcgcttccaaaaacaaattattggtctcgatgatgaa
gttctacgtttctttttggatttttcttggcctggaaatgtccgtcagctgaagcattgt
ttagaagcggcaatgaaccttgttactgatgaggaccggaaaattggatggaagcattta
ccggcttatctgctatccggaaataatgtcaccacaggtggttaccgtcagaaagagaca
attgttaaaccgataaataatgaatattctaagccggacagtattgacgtcttttcatat
attttggagaaagaaaaagaggagatcatcaaggctttgatggagaaccacgggaatgtc
tcgaaaaccgcgaaacaattggggatgcaccgccagtctttgatctatcggataaaaaaa
tataatatcaaataa
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