Candidatus Formimonas warabiya: DCMF_27125
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Entry
DCMF_27125 CDS
T07208
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DCMF_27125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fwa02000
]
DCMF_27125
01504 Antimicrobial resistance genes [BR:
fwa01504
]
DCMF_27125
Transporters [BR:
fwa02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
DCMF_27125
Antimicrobial resistance genes [BR:
fwa01504
]
Gene variants
Macrolide resistance genes
Transporters
DCMF_27125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
NACHT
Dynamin_N
RsgA_GTPase
AAA_15
AAA_23
ABC_tran_Xtn
DUF4407
Motif
Other DBs
NCBI-ProteinID:
ATW27935
UniProt:
A0A3G1L0D2
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All DBs
Position
6030638..6032119
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AA seq
493 aa
AA seq
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MSLVNVTNLTFSYEGTYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLHLLLGKYQYSGN
ISAGISFEYFPFEVQNKKDNTIHVIDSICGDYLHWQLMRELNLLDIAEEVLYRPFDTLSN
GEQTKVLLAALFLKENSFLLIDEPTNHLDMNARKLVSDYLKSKQGFILVSHDRTFLDNCI
DHILSINKMNIEIQKGNFSSWWRNKEMQDNFELAENRMLQKDIKHLTQAARQASDWSDKT
EKTKIGGKQSSGVKGDKGYIGHKAAKMMTRAKAIEARQHTAIEKKSQLLKNIERVDDLKI
SPLPYHTERLAELENISISYGNKAVCTGVNLTIERGDRIALCGKNGSGKSSVLKLICGEQ
ITYAGSFRKGSQLKISYVAQDTGFLRGKLTEYAYAMGIDESLFKAILRKLDFSRLQFEKD
LSDFSRGQQKKVLIAKSLCEQANLFIWDEPLNYIDVLSRIQIEELLFKYQPTILFVEHDR
TFSQNIATKLVNI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgtcaatgttacaaatctaaccttttcctatgaggggacttacgataatatc
tttgagaatgtatcctttcaaattgacaccgactggaaattgggatttacaggaagaaac
ggcagagggaagacgaccttccttcatctgttgcttggcaaataccaatacagcggcaac
atttccgccggtatcagcttcgaatattttcccttcgaagtacaaaacaagaaagacaat
accatccacgtaatcgacagcatctgcggggattatcttcattggcaactgatgcgagag
ttgaatctccttgatattgccgaagaagttttgtatcggccctttgatacactcagcaac
ggggaacaaacgaaagtgctgctggcagccttgtttttaaaagaaaacagttttttgctg
atcgatgagccaaccaaccacctggatatgaacgcaagaaagctggtcagcgattattta
aagtcgaagcagggttttattttggtctcccatgacaggactttcctggacaattgtatt
gaccacatcctttccatcaacaaaatgaatatcgaaattcaaaagggcaatttttcttcc
tggtggcggaataaagaaatgcaagataattttgagcttgcggaaaacaggatgctgcaa
aaggatatcaagcatttgacacaggcggcaagacaggcttccgactggtcggataaaacg
gaaaaaacgaaaattggaggcaagcaatcgtccggagtcaagggcgacaagggttatatc
ggtcataaagccgcgaaaatgatgacgcgggcaaaagccatcgaagcgagacagcacacg
gcaattgaaaaaaaatcacagctgcttaaaaatatcgaaagggtggacgacttaaaaata
tctccccttccgtatcacaccgaaagactggcagaacttgaaaacatctccatctcctat
ggcaacaaggccgtttgcaccggcgtaaacctgaccattgaacggggagaccggattgcc
ctttgcggtaaaaacggttcggggaaatcaagcgtcctgaaactaatttgcggagagcaa
ataacctatgcaggttctttcagaaaaggcagccagctgaaaatatcctatgttgcacag
gatacaggttttctgcgcggaaaattaactgaatatgcctatgccatggggatcgatgaa
agtcttttcaaggcgatacttcgaaagctggacttttccagacttcaatttgaaaaagat
ctatcggatttcagcagaggtcaacagaaaaaagtgcttattgccaaaagtttatgcgaa
caagcaaatctctttatttgggatgagccgctgaactatattgatgtactttcccgtatc
cagatcgaagaactgctgttcaaataccagccgactattttatttgttgagcatgacaga
acattcagccagaatattgccaccaagttggtaaacatctga
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