Fusobacterium watanabei: CCUG74246_05195
Help
Entry
CCUG74246_05195 CDS
T11464
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fwt Fusobacterium watanabei
Pathway
fwt03410
Base excision repair
fwt03430
Mismatch repair
fwt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fwt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCUG74246_05195 (recJ)
03430 Mismatch repair
CCUG74246_05195 (recJ)
03440 Homologous recombination
CCUG74246_05195 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwt03400
]
CCUG74246_05195 (recJ)
DNA repair and recombination proteins [BR:
fwt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CCUG74246_05195 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CCUG74246_05195 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CCUG74246_05195 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PBP2_Ca3427_like
DUF2278
Motif
Other DBs
NCBI-ProteinID:
CAM2394411
LinkDB
All DBs
Position
CCUG74246:complement(1081222..1083756)
Genome browser
AA seq
844 aa
AA seq
DB search
MKKNTKWILENKTNYEKIFEDKREKKLDFIIEDLIENRNLSLDTDFNFNPFNLKDMDIAV
QRIFEAIKNNQKIYIYGDYDVDGITSVSLLYLALSELGANVHYYIPLRDEGYGLNREAIQ
SLKNENANLVISVDCGINSIEEIDFANELNLDFIITDHHEITGDIPKALAVINPKREENI
YSFKYLAGVGTAFILVYALYTKMDKLHDLEKYLDIVAIGTVADIVPLVSDNRKFVKRGLK
LLNNTKWIGIKQLLRKIFPDNWDTREYFAYDVGYIIAPIFNAAGRLEDAKQAVSLFIEED
GFKCLSIIDKLLENNTERKDIQKKILEMSVVEIEKKQLYNKNLILVANKSFHHGVIGIVA
SKILDKYYKPTIIMEIKENEGIATASCRSIEGLNIVECLNSVSDILVKYGGHSGAAGFTI
KIENIEEFYQRVDKFIEENFDKDLFIKKLKIEKILAPYKVNYEFLKELEILEPYGAKNYT
PIFAFRNCEYENLRFTKNSTEHLMLDIKKDGYYFKNCIFFGGGDYYDIISSSKNIDIAFK
LKLETFKDRYMCKLQLEDIKNSNDNIDFKDDYLELNGRDISFPIETVVYPKRSDIEEPLN
LIFNDYGVAITKDRTIIENIDSNLAKILTILKNKFNYEFSVKIKKKYLKSENINLHLEID
VIKDSGLKSFPLKDALIFKEIKNLLIGNFEYNSIQKKVLASIFKDKKKTLAIIDRKRGAT
TIIDTIKFYCKYRNLRLSINNEKEKADFYIFENFTEIEKINSLLTNNILIISNKNIEVNN
FNKIIDDYSIPKNIEYVDYSDISVFKRNNNLYYPFLTDEEKNNMLELIRENKVVFSTREI
IVHF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatacaaaatggattttagaaaataaaactaattatgaaaaaatttttgaa
gataaaagagaaaaaaaattagattttattattgaagatttaattgaaaatagaaatcta
tcacttgatacagattttaactttaatccctttaacttaaaggatatggatatagccgtt
caaagaatttttgaagctataaaaaataatcaaaaaatttatatctatggagattatgat
gttgatggaataacctctgtttctcttttatatttagcactttctgagttaggtgcaaat
gttcactattatatacctttaagagatgaaggatatggtttaaatagagaagctatacaa
agtttaaaaaatgaaaatgctaatttagtaataagtgtggattgtgggattaattcaata
gaagaaattgattttgccaatgaattaaatttagattttataataactgaccaccatgaa
ataacaggagatattccgaaagcacttgctgttataaatcctaaaagagaagaaaatata
tattcttttaaatatcttgcaggtgtgggaactgcttttattttagtctatgctctatat
actaaaatggataaattgcatgatttagaaaagtatttagatattgtggcaataggtaca
gtagcagatatagtccccttagtctcagataacagaaaatttgtaaaaagaggtttaaaa
cttttaaataatactaaatggataggtattaaacaattacttagaaaaatatttcccgat
aattgggatacaagagaatattttgcttatgatgtgggttatattattgcaccaattttt
aatgctgctgggcgtttggaagatgcaaaacaagcagtgagcttgtttatagaagaagat
ggttttaaatgtctttctattatagataaacttttagaaaataatactgaaagaaaagat
atacaaaagaagattttagaaatgtctgttgttgagattgagaaaaagcaattatacaac
aaaaatttaattttggttgcaaataaatcctttcatcatggtgttattggaatagttgct
tcaaagattttggataaatactataaaccaactataattatggaaattaaagaaaatgaa
ggtattgccactgcatcttgtagaagtattgagggtttaaatatagttgaatgcttaaac
tctgtttctgatattttagttaaatatggagggcattcaggtgcagcaggctttacaata
aaaattgaaaatatagaagaattttaccaaagagtagataaatttattgaagaaaatttt
gataaagatttatttataaagaaattaaaaatagaaaaaatattagcaccttataaagta
aactatgaatttttaaaagagttagaaatcttagaaccttatggagctaaaaattatact
cctatttttgcttttagaaattgtgaatatgaaaatttaagatttacaaaaaatagcaca
gaacatttgatgttagatataaaaaaagatggatattactttaaaaactgtatatttttt
ggtggtggagattattatgatattatttcaagttcgaaaaatattgatatagcttttaaa
ttaaaattagaaacttttaaagatagatatatgtgtaaattacaacttgaagatattaaa
aattctaatgataatattgattttaaagatgattatttagaattgaatggaagagatatt
tcttttccaatagaaacagttgtatatcctaaaagatcagatatagaagaacctttgaat
ttgatttttaatgattatggagtagctataacaaaagatagaacaattatagaaaatata
gatagtaatttagcaaaaattttaactatcttaaaaaataaatttaattatgaattttct
gtgaaaataaaaaagaaatatttaaaaagtgaaaatataaatttacatttagagattgat
gtaataaaagatagtggtttaaaatcttttcctttaaaagatgctttaatatttaaagag
attaaaaaccttttaattggaaattttgaatataattctatacagaaaaaagttttggct
tcaatttttaaagataagaaaaaaactttggctattatagatagaaaaagaggagcaacg
acaataattgacactattaaattttattgtaaatataggaatttaaggctttctataaat
aatgaaaaagaaaaagcagatttttatatttttgaaaattttactgaaatagaaaaaatc
aattctctattgacaaataatattcttataatttcaaataaaaatattgaagttaataac
tttaataaaattatagatgattattctatacctaagaatattgagtatgttgattatagt
gatataagtgtttttaaaagaaataataatttatattatccatttttaactgatgaagaa
aaaaataatatgttagagttgataagggaaaataaagttgtattttcaacaagagaaata
attgtacatttttag
DBGET
integrated database retrieval system
