Flammeovirga yaeyamensis: KMW28_02950
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Entry
KMW28_02950 CDS
T07356
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KMW28_02950 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fya03400
]
KMW28_02950 (ruvB)
Enzymes [BR:
fya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KMW28_02950 (ruvB)
DNA repair and recombination proteins [BR:
fya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KMW28_02950 (ruvB)
RecFOR pathway proteins
KMW28_02950 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
nSTAND3
AAA_22
NB-ARC
Mg_chelatase
AAA_14
AAA_PrkA
RNA_helicase
Sigma54_activ_2
NTPase_1
bpMoxR
TIP49
ABC_tran
NPHP3_N
TsaE
Bac_DnaA
DUF815
KAP_NTPase
Rad17
AAA_18
AAA_33
AAA_28
Torsin
Motif
Other DBs
NCBI-ProteinID:
QWG02549
UniProt:
A0AAX1N4S4
LinkDB
All DBs
Position
1:complement(754815..755846)
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AA seq
343 aa
AA seq
DB search
MREDYLNGDNSGFSDSDRDIERALRPLSFDDFTGQDKIVENLKIFVLAAKKRGEPLDHVL
LHGPPGLGKTTLSNIIANEMEAEIKITSGPVLEKPSDLAGLLTNLEENDVLFIDEIHRLN
PVVEEYLYSAMEDFRIDIMLDSGPSARTIQIDLNPFTLIGATTRSGLLTAPLRARFGINA
RLQYYDSALLSTIVKRSSGILQTPINEDAAFEIARRSRGTPRISNNLLRRTRDFAEIKGD
GTINLDIAKMALGALNVDQGGLDEMDNRILTTIIEKFKGGPVGINTIATACGDEAETIEE
VYEPFLIQEGFIKRTSRGREVTLKAYEHLGIIPPSDGNQGSLF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagactatttaaatggtgacaattcagggttctctgattccgatcgagatatt
gagcgtgcattaagacccctttcctttgatgactttaccggtcaggataagattgtcgag
aacctaaaaatatttgtgctagcagccaaaaagagaggtgagcctcttgatcatgtcttg
ctacacggccctccgggtttgggtaaaaccaccctttccaacattattgccaacgaaatg
gaggcggaaataaaaataacttccggccctgttttagaaaagcctagtgatttagccgga
cttttaaccaacttagaggaaaacgatgtattatttattgatgaaatacaccgtttaaat
cctgttgtggaagaatatttatattctgccatggaagattttagaattgatattatgttg
gactcgggaccaagtgcccgtaccatacaaattgatttaaaccctttcactctcattgga
gcaacaacgagatcgggcttattaacagctccacttcgagctcgttttggtatcaatgcg
cgactgcagtattatgattctgctttactttctacgattgtaaagagatcttcgggaatt
ttacagacaccaattaatgaagatgctgcatttgaaattgccagaagaagtagaggaacg
ccaagaatatcaaataatcttttgagaagaacaagagactttgcagagattaaaggagat
ggaaccatcaatcttgatattgcaaaaatggctttgggtgcacttaatgtggatcaagga
ggtttggacgaaatggacaatcgtattctcaccaccatcattgaaaaattcaaaggtggc
cctgtgggaatcaacacaatagctacagcctgtggtgatgaagctgagacgattgaagaa
gtttatgaaccttttttaattcaagaaggatttatcaaaagaacctctcgcggtagagaa
gttaccttaaaagcatacgaacatttgggaattatacccccttctgatggaaatcagggg
tcattgttttaa
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