Flammeovirga yaeyamensis: KMW28_06630
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Entry
KMW28_06630 CDS
T07356
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya03420
Nucleotide excision repair
fya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KMW28_06630
03430 Mismatch repair
KMW28_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fya03400
]
KMW28_06630
Enzymes [BR:
fya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KMW28_06630
DNA repair and recombination proteins [BR:
fya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KMW28_06630
MMR (mismatch excision repair)
Other MMR factors
KMW28_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QWG03252
UniProt:
A0AAX1N727
LinkDB
All DBs
Position
1:complement(1711487..1713730)
Genome browser
AA seq
747 aa
AA seq
DB search
MDYLEGLNPPQREAVVTMDGPMMIIAGAGSGKTRVLTYKIAHLIANGVEPFNILSLTFTN
KASREMKERIVDAVGDDAKNLWMGTFHSVFARILRFEAEKIGYQSNFTIYDSEDAKSVIK
GVVKDFRLDDKLYKPSVVLSRISSAKNNLISWRAYEQNNDLRLEDEASGRAKIAEIYKEY
AIRCFRANAMDFDDLLFNTSVLFQQHLDVLNKYQSKFKYVLIDEFQDTNVTQYFITRKLA
ARNRNICVVGDDAQSIYAFRGANIQNILNFKTDYPELKVIKLEQNYRSTQTIVEAANSVI
AHNKNQLEKNTFTQNAIGERIEVFRTPTDLEEARGVAQSIQQAMIKDHIPASDIAILYRT
NSQSRALEEALVKLSIKAQIFGGLSFYQRKEIKDMIAYLKFVTNPKDEEAFKRIINYPKR
GIGPTTVNNLFVKAAENKMGIWDIVANVRKFFGGRVATQVENFANMIKVFQMQSEQKNAF
ETASFIAKNSGILRELYDDKTPEGKNRYDNLQELLNGIQGFTDDPEKEDKSLTTYLEEIS
LITTQDKEDVSDAITLMTIHMSKGLEFDYVYLVGMEENLFPSQMMLETREDLEEERRLFY
VAITRAKQRLYMSYALQRYRFGKTIMCDPSRFIDEIAPQYISMRRSSISEDLGPGSTPGF
SNFRSLRQQPSNFIRKAVKPKDDRPFHPSNTDNLTIGQTVRHTKFGDGKVEKISDEGLDR
RAIINFEEVGKKTLILTFAKLMILEDE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggattatttagaaggattaaacccacctcagcgtgaagctgtagtgactatggatggc
ccaatgatgatcattgccggtgcaggatcaggaaaaacaagggtattaacctataaaatt
gctcacttgattgccaacggagtagaaccgttcaatattctttctctaacctttaccaat
aaggcatcaagagaaatgaaggaacgtattgtcgatgctgtaggcgatgatgctaagaat
ttatggatgggtactttccactccgtgtttgctagaattcttcgttttgaagcggagaaa
atcggttatcaatccaactttactatttatgattctgaagatgctaaatcagtgatcaaa
ggagtagtaaaagatttccgtctagacgataaattatataaaccaagtgtagttttatct
agaatctcctcggcaaaaaacaatttgatatcttggagagcttacgaacaaaataacgac
ttacgtttagaagacgaagcttctggaagagctaaaattgcggagatttataaagaatat
gctattcgttgtttcagagcaaatgcgatggatttcgacgacctcctttttaatacatcc
gttttattccaacaacatttagatgtcttaaacaaatatcaaagtaaatttaaatatgtg
cttattgatgagtttcaagacaccaacgtcacccaatattttatcaccagaaaattggcg
gcaagaaaccgtaacatctgtgtggtaggcgatgacgcacaatctatctatgcatttaga
ggggcaaacatccaaaacatcctcaactttaagaccgattacccggaattaaaggtgatc
aaattggagcagaattaccgttctacacaaaccattgtagaagcagccaactctgttatt
gcacacaataagaatcaattagaaaaaaatacatttactcaaaatgctattggcgaacgt
atcgaagtattccgtacgccaacagatttagaggaagcacgtggagtggcacaaagtata
cagcaagcgatgattaaggatcatattcctgcttctgatatcgccattctttatcgaacg
aactctcagtcaagagctctagaggaagctttggtaaagttatctattaaagctcaaatc
tttggtggactttctttctatcagagaaaggaaattaaggatatgatcgcttacttgaag
tttgtgaccaacccaaaagacgaagaagcttttaaaaggatcatcaactaccctaaaaga
ggaattggaccgacaacggtaaacaacctttttgtaaaagcggcagagaacaaaatgggc
atttgggatatcgttgccaatgtcagaaagttctttggaggtcgtgtggcgacacaagtg
gagaactttgccaatatgattaaggtcttccaaatgcaatcagaacaaaagaatgctttc
gagaccgcatcatttattgccaaaaactctggtattctaagagagttatacgacgacaaa
acgcctgaaggtaaaaaccgatacgacaacttacaggaacttctaaacggtatacaagga
tttactgatgatcccgaaaaagaagataagagtctaacaacttatttagaagaaatctct
ttgatcaccactcaagataaagaagatgtttcagatgccatcaccttaatgaccatccac
atgtcgaaaggtttggagtttgattacgtctaccttgttggtatggaagagaatcttttc
ccttctcaaatgatgttggagacaagagaagacctggaagaagaaagacgtttattctat
gtggcaattactcgtgccaagcagcgtctgtacatgtcttatgccttgcaacgttaccgt
tttggtaaaaccattatgtgtgacccaagtagatttatagacgaaattgctcctcaatac
attagtatgagaagaagcagtatttcggaagacttaggtcctggtagcacacctggcttt
tctaactttagatctttaagacaacaaccttccaactttatcagaaaggcggtgaagcca
aaggatgatcgtcctttccacccatcaaatactgataatcttactattggacaaacagta
agacatacaaagtttggcgatggtaaagtagaaaaaatctcggatgaaggtttagacaga
agagcgatcatcaatttcgaagaggtgggtaaaaagaccttaatccttactttcgctaag
ttgatgatcctagaagatgaataa
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