Flammeovirga yaeyamensis: KMW28_08425
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Entry
KMW28_08425 CDS
T07356
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya03030
DNA replication
fya03430
Mismatch repair
fya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KMW28_08425
03430 Mismatch repair
KMW28_08425
03440 Homologous recombination
KMW28_08425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fya03032
]
KMW28_08425
03400 DNA repair and recombination proteins [BR:
fya03400
]
KMW28_08425
Enzymes [BR:
fya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KMW28_08425
DNA replication proteins [BR:
fya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KMW28_08425
DNA repair and recombination proteins [BR:
fya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KMW28_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QWG03593
UniProt:
A0AAX1ND49
LinkDB
All DBs
Position
1:2153759..2155135
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AA seq
458 aa
AA seq
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MKYAVIDLETTGGSVAQGGKIIEIAIIVLENGVEIDRFESFVNPEMNIPPFIQQLTGIKN
ATVKDAPKFFEIAKKVVEVTENCTFVAHNAEFDYNFVKDEFKLLGYKYLRNSLCTVETSR
ILLPGKKSYSLGKLCDEIGIPHNKRHRAIGDTEATAKLFQLLLEQENAEQVIEEMTVYDV
YSSKKHYMIKKEVIDALTDETGVYYLYNEEQELIYIGKSKNIRKRILQHLSNKSTPRAIR
MAELVRDVKTTITGSELIALLLESDEIKKHQPRFNRAQRRTKQFFGIYKYIDDNNYINFR
IAPLSEGDYPVTTTFSRKEAERILDRMIEKNNLCQKLCGIDHSQNACFRYQLKNCKGACC
GEETAESYNVRANEAAMRFSYGAPNVFLIDKGREGNERGVIQIENGIYKGFGYVKKSNNY
NPDKLKKVITKYKDNADVNKIIRGMLRKKKGIERKVFY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgctgtaattgatcttgaaactacaggaggttccgtcgcccaaggagggaag
attatcgaaatcgccataattgtcttagaaaatggtgttgaaatagaccgttttgagtct
tttgtaaatccagagatgaatattcctccttttattcaacaattgacaggaattaaaaat
gccactgtaaaggatgctcccaagttttttgaaatcgccaaaaaagttgtggaggtaact
gaaaattgtaccttcgtggcacataacgcagagtttgattacaattttgtaaaagatgag
tttaaattattgggttacaaatacctaagaaactcattatgcaccgtagaaacatcccga
attttattgcctggtaagaaatcatatagtttgggtaaattatgtgatgaaatcggcatt
cctcataataaacgtcaccgtgcaattggagatacagaagcaaccgctaaattgtttcaa
ttactcctagaacaagaaaatgctgaacaggttattgaagagatgactgtttatgatgta
tatagttctaaaaagcattatatgattaaaaaagaagtcatagatgctttaactgatgag
actggcgtttattatctctataatgaagaacaggaactgatttatatcggtaaatcaaaa
aatatcagaaaaaggatattgcaacatttatcgaataagtctacgcctagagctataaga
atggcggaattggttcgtgatgtaaaaacaacaattacgggtagcgaactgatagcacta
cttttggaatctgacgaaataaaaaaacatcaacctagatttaatagagcacaaagaaga
acaaaacagttctttggtatctataaatatattgatgataataattatatcaattttaga
attgcacctctttctgaaggtgactaccctgtaactactactttttcgagaaaagaagct
gaaaggatattagacaggatgatagagaaaaacaatctatgtcagaagctttgtggtatc
gatcatagccaaaatgcttgctttagatatcaattgaaaaattgtaaaggagcttgttgt
ggtgaagaaacagcagagtcatacaatgtaagagcgaatgaagcagctatgaggtttagt
tatggtgctccaaatgtcttcttaatcgataaaggtagagaaggtaacgagaggggtgtc
attcagattgaaaatggtatatacaagggttttggttatgtaaagaaaagcaataactat
aatccggataagttgaaaaaagtaatcactaaatataaagacaatgccgatgtgaataag
attattcgaggcatgttgagaaagaaaaaaggaattgagagaaaagttttttattaa
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