Flammeovirga yaeyamensis: KMW28_18275
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Entry
KMW28_18275 CDS
T07356
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KMW28_18275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fya03021
]
KMW28_18275
03400 DNA repair and recombination proteins [BR:
fya03400
]
KMW28_18275
Enzymes [BR:
fya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KMW28_18275
Transcription machinery [BR:
fya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KMW28_18275
DNA repair and recombination proteins [BR:
fya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KMW28_18275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
QWG01577
UniProt:
A0AAX1N2V7
LinkDB
All DBs
Position
1:complement(4605828..4606823)
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AA seq
331 aa
AA seq
DB search
MSILAFQKPDKLVKESADEFKGLFEFKPLEKGYGVTVGNALRRILLSSLEGYAIVGIKFP
NVLHEYSTIDGVVEDVTEIILNLKKVRFKAEVENPSQKININISGKSEFKAGDIAQFTEE
YKVLNPDFTICNLDESVNLQVEFTMMNGRGYLSADEQAESEADDIVGFIPIDAIFTPVKN
VRYHVEDFRVDDRTDFEKLVIEVITDGSVEPEESLKDAANILIQHFMLFSDNNMIIDDGG
NDAQVEIDDEYLRMRKLLKTSLSDLDLSVRAYNCLKAADVKTLGDLASLEISDMMKFRNF
GKKSLTELEQLMTDKKLSFGMDVTKYRLDED
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcttgcttttcaaaaacctgacaagttggtaaaggaatcggctgatgaattc
aaaggccttttcgaattcaaacctcttgaaaaaggatacggcgtaacagttggtaacgct
cttagacgtatattactttcgtcgcttgaaggatatgctatcgtgggtatcaaattccca
aatgtacttcacgaatattcgactatcgatggcgttgtagaagatgtgactgagattatc
ttaaacttaaagaaagttcgctttaaggctgaggtagaaaatccgtcgcaaaaaatcaac
atcaacatcagtggtaaaagcgaatttaaagcgggtgatattgctcagttcacagaagaa
tataaagtccttaacccggattttacaatttgtaacttagacgagagcgtaaatcttcag
gttgagttcacaatgatgaacggccgtggatacttatctgcagacgaacaagctgagagt
gaagctgatgatattgttggttttattccgattgatgcaatcttcactccagtaaaaaat
gttagataccatgttgaagactttagagttgacgaccgtactgactttgagaaattggtg
attgaagttattactgatggttctgttgagccagaggagtctttaaaagacgccgctaat
atcttgatccaacacttcatgttgttctctgacaataatatgattattgatgatggagga
aacgacgctcaagtggaaattgatgatgaatacttaagaatgcgtaagcttcttaaaaca
tcattatctgatcttgatttatcagttcgtgcatacaattgcttgaaagctgcagatgtt
aaaactttgggagatttagcatctttagaaatttcagacatgatgaagttcagaaacttt
ggtaagaaatcacttactgagttagaacaattgatgactgataagaaattatcatttggt
atggatgtgactaaataccgtcttgacgaagattag
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