Flammeovirga yaeyamensis: KMW28_20280
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Entry
KMW28_20280 CDS
T07356
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya00260
Glycine, serine and threonine metabolism
fya00460
Cyanoamino acid metabolism
fya00630
Glyoxylate and dicarboxylate metabolism
fya00670
One carbon pool by folate
fya00680
Methane metabolism
fya01100
Metabolic pathways
fya01110
Biosynthesis of secondary metabolites
fya01120
Microbial metabolism in diverse environments
fya01200
Carbon metabolism
fya01230
Biosynthesis of amino acids
fya01240
Biosynthesis of cofactors
fya04981
Folate transport and metabolism
Module
fya_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KMW28_20280
09102 Energy metabolism
00680 Methane metabolism
KMW28_20280
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KMW28_20280
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KMW28_20280
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KMW28_20280
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KMW28_20280
Enzymes [BR:
fya01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KMW28_20280
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
ABC_toxin_N
Motif
Other DBs
NCBI-ProteinID:
QWG01943
UniProt:
A0AAX1N820
LinkDB
All DBs
Position
1:5106819..5108093
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AA seq
424 aa
AA seq
DB search
MKRDDIIFDLIDREKERQISGIELIASENFASEQVMAAMGSVLTNKYAEGLPGKRYYGGC
EVVDEVENLAIDRLKELFGAAWANVQPHSGAQANAAVMLAVLKPGDKILGFDLSHGGHLT
HGSPVNFSGKLYKPTFYGVEKETGLIDFDKVVETARKEKPQLIIAGASAYSREWDYAKLR
AVADEIGALLMADISHPSGLIAKGKLNDPIKHCHIVTTTTHKTLRGPRGGVIMMGEDFEN
PWGLKTPKGKTRMMSSLLDSGVFPGTQGGPLEHVIAAKAIAFGEALTPEYDAYVTQVQKN
AQEMAKHFLAKGYEIISGGTDNHMMLIDLRSKNLTGKIAENTLIKADITINKNMVPFDDK
SPFVTSGMRVGTAAVTTRGLKEADMGKIVDFIDRVLMNHENDAEIEKVRAEINEWMRQFP
LFQW
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagatgatatcatctttgatcttatagatcgcgaaaaagaaagacaaatttct
ggcatcgaattgattgcttcagaaaacttcgcctcagaacaagtgatggcagccatgggt
agtgtattgactaacaaatacgctgaaggcctaccaggtaaacgttattacgggggttgt
gaagtagttgatgaggtagaaaaccttgctatcgaccgtcttaaagaactatttggtgcg
gcttgggccaatgttcaacctcactctggtgcacaagcaaacgcagcagttatgttagct
gttttaaagccaggtgataaaattttgggttttgacttatctcacggtggtcacttaact
cacggttctccagtaaacttctctggaaaactttacaagccaacattctatggtgtagaa
aaagaaactggtttaatcgacttcgataaagtggttgaaactgctcgtaaagaaaagcca
caattaattattgctggtgcttctgcttattctcgtgagtgggattacgctaaattacgt
gctgtagctgacgaaatcggagctttattaatggccgatatttctcacccttcaggattg
attgcaaaaggtaaactaaacgatcctatcaaacactgtcatatcgtaactacaacaact
cataaaactcttcgtggaccaagaggtggtgtaattatgatgggcgaggactttgaaaac
ccatggggattaaaaactccaaaaggtaaaactcgtatgatgtcttctttattagactca
ggtgttttccctggtactcaaggtggtccattagagcacgtaatcgcagctaaagctatc
gctttcggtgaggctttaactccagagtatgatgcttatgtaacacaagtacaaaagaac
gctcaagaaatggcaaaacacttcttggctaaaggttatgaaatcatttcaggtggtaca
gacaaccacatgatgttgatcgaccttcgttcgaaaaacttgacaggtaagatcgctgaa
aatacattaatcaaagcggatattactatcaacaaaaacatggtaccattcgatgacaaa
tctccatttgttacttcaggtatgcgtgttggtactgcagccgtgactactcgtggtctt
aaggaagcagatatgggtaaaatcgttgacttcatcgatcgcgtattgatgaaccacgaa
aatgatgctgaaattgagaaagtgagagctgagatcaatgagtggatgcgtcagttccca
ttgttccaatggtaa
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