Flammeovirga yaeyamensis: KMW28_23145
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Entry
KMW28_23145 CDS
T07356
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
fya
Flammeovirga yaeyamensis
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fya03000
]
KMW28_23145
Transcription factors [BR:
fya03000
]
Prokaryotic type
Helix-turn-helix
Other families
KMW28_23145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
Sigma54_activ_2
PAS
PAS_4
PAS_8
PAS_3
AAA_5
AAA_2
HTH_8
AAA
MCM
PAS_7
Mg_chelatase
ParM_N
AAA_19
AAA_7
AAA_22
CCDC138_cc
DUF2381
AAA_16
nSTAND3
AAA_30
AAA_3
CTLH
Wtap
DUF2205
Motif
Other DBs
NCBI-ProteinID:
QWG05321
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Position
2:766324..768243
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AA seq
639 aa
AA seq
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MPQKVVWDQKWSEVALNSAMDIIFWVNEDGYIDKCNDSFLEICGYKNEELGKVSILDIDE
NLSKRDWKRIWSDLKTNNTISHETTIINKKNEYLDVEMSFTGVSIGTGIICFITCHDITE
IVQLRQQLDEALKVIDEINVKTGNDNVSEDSSLEKKALLEQLQKLQKHHESILQSAGEGI
YGLDTMGRTTFANEAAVKLVGYSLEEMIDVSQHDLIHHTKPDGSHYPRHTCNIYASFKDG
KVHHSDDEVFWRKDGSSFPVEYVSTPLYDNNDKLIGAVVTFKDITHRKETERALKQTNDD
LKMALQEVEELKSKLEEENEYLQNEINLNNKFEELISTSKVFKENVFTKIDQVANTNATV
LVLGESGTGKELIARAIHNHSDRKNKPLIKVNCTALPANLIESELFGHEKGAFTGAISRK
AGRFEMADGGTLFLDEFGEISLDLQVKLLRVLQEGEIERIGGTETIKIDVRIIAATNVNL
EKAVKDKKFREDLYYRVNVFPIHVPPLNARKDDIPLLVNHFLKRFNNQFSKNIDNISVGA
MKKLTTYNWPGNVRELQNVIERAVIISNGKRLDIKGLKDSKTIEDDGILTLSENEKKHIL
KVLKMTNWRISGDKGAARILDINRTTLEARMKKLGIKRP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagtagtttgggatcaaaaatggtcagaagtagcattaaattctgctatg
gatatcattttttgggttaatgaagacgggtatattgataaatgcaatgattctttcctg
gaaatatgtggttataagaatgaagaattagggaaagtttccattttagatattgatgaa
aatctatccaaaagagattggaaaaggatatggagtgaccttaaaacaaacaatacgatc
agccatgaaaccactatcatcaacaaaaagaacgaatatcttgatgttgaaatgagtttt
accggggtaagtataggaacgggtattatttgttttataacatgccacgacatcactgag
attgttcaattaagacaacaactagatgaagcacttaaggtgattgatgaaatcaatgta
aaaacgggcaatgataatgtatcagaagattcttctttagaaaaaaaggcattattagaa
caattacaaaaacttcagaagcatcatgagtccattcttcagtcagcaggtgaaggtatt
tatggattagatactatgggaaggactacttttgctaacgaggcggcagtaaaattggta
ggctactctcttgaggagatgattgatgtctctcaacacgatttaatccatcatacaaaa
ccggacggttctcattacccaagacacacgtgtaatatttatgcgtcatttaaagatggg
aaagtacaccatagtgacgatgaggttttttggcgtaaagacggttcatcattccctgtt
gaatatgtgagtactccactctacgataacaatgataaattgattggggcagtggtgact
tttaaagatataacacatagaaaggagacggaaagagcgttaaaacaaacgaatgatgat
ctaaaaatggctcttcaagaggtggaagagttaaagagcaagttggaagaagaaaacgaa
tatcttcagaacgaaatcaatctaaataataaatttgaggaactaattagtacaagtaag
gtcttcaaagaaaatgtttttactaaaattgatcaggtggccaataccaatgcgacagtt
ttagttttaggggagtcaggcacaggaaaagaacttattgcaagagcaattcacaatcat
agcgatagaaagaataagcctttgattaaagtgaactgtacagccctacctgccaactta
attgagagtgaattattcggacacgaaaaaggggcttttacaggagcaatttctagaaaa
gccggtaggttcgaaatggcagatggaggtacacttttcttggatgaatttggtgagata
tcattagatcttcaggttaaattattgagggttttacaggaaggtgaaatcgaaagaatt
ggtggaacagaaacgataaagattgatgttagaattattgcagcaaccaacgtcaatttg
gagaaagcggtaaaagataaaaagtttagagaagatctttattatagggtaaatgtcttt
ccaattcatgtccctccattaaatgcaaggaaagatgatattcctttgttagtcaatcat
tttttgaaaagatttaataatcagtttagcaaaaacatagataacatttctgttggtgct
atgaaaaaattgacaacctacaattggcctggaaatgtgagagaactacaaaatgttatt
gaaagagccgtaattatatctaatggtaaaagattggatattaaagggcttaaagacagt
aagacaatagaagatgatggtattttaactttatctgaaaacgaaaagaaacatattcta
aaggtattgaaaatgaccaattggcgtattagtggtgataaaggtgctgcgagaatattg
gatattaatcgtacgactttagaagcaagaatgaagaaattaggtattaaaagaccataa
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