Fuscovulum ytuae: QF092_01120
Help
Entry
QF092_01120 CDS
T09905
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
fyt
Fuscovulum ytuae
Pathway
fyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QF092_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fyt03019
]
QF092_01120
03009 Ribosome biogenesis [BR:
fyt03009
]
QF092_01120
Enzymes [BR:
fyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QF092_01120
Messenger RNA biogenesis [BR:
fyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QF092_01120
Ribosome biogenesis [BR:
fyt03009
]
Prokaryotic type
rRNA processing factors
QF092_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
SelP_N
Motif
Other DBs
NCBI-ProteinID:
WGV16446
LinkDB
All DBs
Position
235803..238583
Genome browser
AA seq
926 aa
AA seq
DB search
MAKKMLIDATHAEETRVVVVDGNKVEEFDFETVNKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPVADRKALIEEERAYNRAQEEEENRRSRSRSRPRPEGAR
RDAVKTVEISGMDVVDLDEEETEDNAAEAVEDLAEAAPVAEQAAEHDHGHDHDHGHDHGQ
DGEQNGENGSENGGENGDRPYRAMDHASDTDDEIESVAEEDVAEEISAPRKPRPRKYKIQ
EVIKVRQIMLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITQAADRKK
LKEIAQEIEVPEGAGLIIRTAGAKRTKAEIKRDYEYLMRLWEQIRELTLKSIAPAAIYEE
GNLIKRSIRDLYSREIDEVLVEGEAGYRTAKDFMRMIMPSHAKVVKRYEDTMPLFARYQV
ESYLGGMFNPVVQLKSGGYIVIGVTEALVAIDINSGRATKEGSIEETALKTNLEAAEEIA
RQLRLRDLAGLIVIDFIDMEERKNNAAVEKRLKEKLKTDRARIQVGRISGFGLLEMSRQR
LRPGMLESTTQPCSHCHGTGLIRSDDSLGLQILRALEEEGTRKRSKEVLLKAPVGIVNFL
INQKREHVALIEARYGMSVRIEGDPALVSPDYVIEKFKTATRVVPEPTAVISGHAGLMGA
PVDEDEDEDLPFDEDLDEVEEVEVAEEPREARGEARAEGRDGRAATGDGGGKKKRRRRRK
KKGGAQGGQPGAEATAATGEGAESDEEDGDEAEVAVTEAAAEAAAEPVVTEAVVSEAPAE
VAAEPAPEAPKKKVTRSRSRKAAPAAEAVTAEPVADAAVEVAVEAAAPVEAVEPPAKPAK
KPASRSRAKKKPESEAPAAEVAAAEVAVEAAAFPADPGLAPAPEAALQADPGEAEVAAIA
PAPAAEPAAEEGPPKPRKKGWWSLGR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagatgcttatcgacgccacgcatgcggaagagacccgcgtcgtggtggtg
gacggaaacaaggttgaagaattcgactttgaaacggtgaacaaacgccagcttgctggc
aatatctacctcgcaaaggtcacacgggttgagccgtcgcttcaggcggcctttgtcgat
tacggcgggaaccggcatggtttccttgcctttgccgaaatccacccggactactaccag
atccccgtcgcggaccgtaaggcgctgatcgaggaagagcgcgcctataaccgcgcgcag
gaagaggaagagaaccgccgctcgcgcagccgttcgcggccgcgccccgaaggcgcgcgc
cgcgatgcggtgaaaacggttgagatcagcggcatggatgtcgtcgatctggacgaggaa
gagaccgaggacaacgccgccgaggcggtggaggatctggccgaggccgcacccgtggcc
gagcaggccgccgaacacgaccatgggcatgatcacgaccacgggcatgaccatgggcag
gatggcgagcagaacggcgaaaacgggtccgagaatggcggcgagaatggcgatcgcccc
taccgtgccatggaccatgccagcgacacggatgacgagatcgagtcggtcgccgaagag
gatgtcgccgaagagatcagcgcaccgcgaaagccccgcccgcgcaaatacaagattcaa
gaagtgatcaaggtccggcagatcatgctggtccaggtcgtgaaggaagagcgcggcaat
aagggcgcggcgctgaccacctatctgtcgctggcaggccgctattgcgtgctgatgccc
aacactgcgcggggcggcggcatttcccgcaagatcacgcaggccgcagaccgcaagaaa
ctgaaggaaatcgcgcaagagatcgaggtgccggaaggcgcgggcctgatcatccgcacg
gccggggccaagcgcaccaaggccgagatcaagcgtgattacgaatacctgatgcggctg
tgggaacagatccgcgaactcacgctcaaatccattgcgcccgccgcgatctatgaggaa
ggcaacctgatcaagcggtcgatccgcgatctttatagccgcgagatcgacgaggttctg
gtcgagggcgaggcgggctatcgcaccgccaaggacttcatgcggatgatcatgccgtcc
cacgccaaggtggtgaagcggtatgaggacacgatgcccctcttcgcccgctatcaggtg
gaaagctatctgggcggcatgttcaacccggtggtgcagctgaaatccgggggctacatc
gtcatcggcgtgaccgaggctttggtggccatcgacatcaactcaggacgggccacgaag
gaagggtcgatcgaggaaaccgcgctgaagacgaaccttgaagcggcggaagagatcgcg
cggcaattgcgtctgcgcgaccttgccgggctgatcgtgatcgacttcatcgacatggaa
gagcggaagaacaacgccgccgtcgaaaagcgcctgaaggaaaaactgaagacggatcgc
gcacggattcaggtgggccgcatctcgggctttggcctgttggagatgagccgccagcgc
ctgcgtcccggcatgctggaaagcaccacgcagccctgttcgcattgccatggcacgggt
ctgatccggtcggatgacagtctgggcctgcaaatcctgcgtgcgctggaggaagagggg
acgcggaagcggtcgaaggaggtgctgttgaaggcgcctgtggggatcgtgaacttcctc
atcaaccagaagcgcgaacatgtggcgctgatcgaggcgcggtatggcatgagcgtgcgg
atcgaaggcgatccggcactggtcagcccggattacgtgatcgagaagttcaagacggcc
acccgtgtggtgccggaaccgacggcggtgatttcgggccatgccggtctgatgggtgcc
ccggtcgatgaggacgaggacgaggatctgcccttcgacgaggatctggacgaggtcgaa
gaggttgaggtcgccgaagagccgcgcgaggcgcggggtgaggcgcgggccgaagggcgc
gatggtcgcgcggccacgggcgacggcggcggtaagaaaaagcgccgtcgtcggcgcaag
aagaagggcggcgcgcagggcggccagccgggggctgaggcgacagccgccaccggcgaa
ggggctgagagcgacgaagaggatggcgacgaggccgaggtcgcggtgactgaggctgcg
gctgaggccgcggcggagcccgtagtgaccgaggcagtggtgagcgaggcccctgccgaa
gtggccgcagagcccgcgccggaagcgccgaagaagaaagtgacccggtcgcgcagccgc
aaggcggccccggcggccgaggccgtgacggcagagcctgtggcggatgcggcggttgag
gtggcggttgaggcggcggccccggtcgaggcggtggagcccccggcgaaacccgccaag
aaacccgccagccggtcgcgcgcgaagaagaagcccgagtccgaagcacccgcggccgaa
gttgcggcggccgaagttgcggtggaagccgcggctttccctgccgatccgggcctggcc
cccgcgccggaggccgcgctgcaggccgatccgggcgaggcagaggtggccgccatcgcg
cctgcacccgcagcagaacctgcggcagaggaaggcccgcccaagccgcgcaagaagggc
tggtggtcgctcggccgctaa
DBGET
integrated database retrieval system
