Fuscovulum ytuae: QF092_08220
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Entry
QF092_08220 CDS
T09905
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
fyt
Fuscovulum ytuae
Brite
KEGG Orthology (KO) [BR:
fyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fyt03016
]
QF092_08220 (thpR)
Enzymes [BR:
fyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QF092_08220 (thpR)
Transfer RNA biogenesis [BR:
fyt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QF092_08220 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WGV17753
LinkDB
All DBs
Position
complement(1714827..1715366)
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AA seq
179 aa
AA seq
DB search
MIRAFLALPLPDTVLSALRVQQFLLPLPQKTDPETFHLTLVFLGEQPEPVLQAAHERFSE
VRLPPFPLALKSLGLFGGAKPRAAWAGVAPSEPLTRLQAKLDHAARSAGIDTESRRFTPH
VTLGRFAPPGPEESFRLERAIAAGSTFTTPEWAVDHFALYESRLTKRGSVYTELARYDL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgccttcctcgcccttcccctgccggacaccgtgctctccgccctgcgcgtg
cagcaattcctgctgcccctgccgcagaaaaccgatcccgaaaccttccatctcaccctc
gtcttccttggcgaacagcccgaacccgtccttcaagcggcacatgaacggttcagcgag
gttcgcctcccccccttcccccttgccttgaaatcccttggcctattcggcggcgcaaaa
ccccgcgcggcttgggcaggcgttgccccctccgaacccctgacccggctgcaagccaaa
ctcgaccacgccgcccgcagtgcggggatcgacaccgaaagccgccgcttcaccccccat
gtcacgctgggccgctttgccccgccggggcctgaggaaagcttccgcctcgaacgcgcc
atagccgcaggcagcacctttaccacccccgaatgggcggtggaccacttcgccctctac
gagtcgcgcctcacgaaacggggcagcgtctataccgaactcgcccgctacgacctataa
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