Fuscovulum ytuae: QF092_10195
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Entry
QF092_10195 CDS
T09905
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fyt
Fuscovulum ytuae
Pathway
fyt03030
DNA replication
fyt03430
Mismatch repair
fyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QF092_10195 (dnaE)
03430 Mismatch repair
QF092_10195 (dnaE)
03440 Homologous recombination
QF092_10195 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fyt03032
]
QF092_10195 (dnaE)
03400 DNA repair and recombination proteins [BR:
fyt03400
]
QF092_10195 (dnaE)
Enzymes [BR:
fyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QF092_10195 (dnaE)
DNA replication proteins [BR:
fyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QF092_10195 (dnaE)
DNA repair and recombination proteins [BR:
fyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QF092_10195 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
WGV14670
LinkDB
All DBs
Position
complement(2105351..2108782)
Genome browser
AA seq
1143 aa
AA seq
DB search
MTNAPRFIHLRVHTEHSLLEGAIPVKKLVKLVAAAEMPAVAVTDTNNMFCALEFSVLAKD
AGLQPIVGCQVAVAHDPAQAGEKLRMPAPVVLLAQSEAGYMNLMKLNSCLYLDKAGQLNQ
VTLEELERYSAGLICLTGGAEGPVGRFLQLGQGAKARALMERLAAAFGDRLYVELQRHPG
EGGRLTEAETATERGFVEMAYDMGLPLVATNDVYFPKSEMYEAHDALICIAEGAYVDQSQ
PRRRLTPQHYLKSEAEMCALFADLPEALENTVEIARRCAFMAAKRKPILPRFADDEVQEL
RRQANEGLKNRLAVIPHATTVEEYQARLDFELDIIEKMGFPGYFLIVSDFIKWAKAHDIP
VGPGRGSGAGSLVAYALTITDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQERYGREKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPLEGVKPVSITKAL
ADEPRLREAAKEEVVGRLLTYAEQIEGLYRNASTHAAGVVIGDRPLDELVPLYQDPRSDM
PATQFNMKWVEAAGLVKFDFLGLKTLTVIQNALDLLKLRGVTLDISLIPLDDQPTYELYA
AAKTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPVYCEVKNGQRELES
IHPTIDHILKETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAEEMAKERPKFI
EGAKATHNIDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAYLKANYPVEFMAAVM
NCDIHLTDKLAVYKREVDKLGITTVPPCVNRSLATFTVVEGQVVYGLGALKNVGVDAMRT
IVEARGGQAFVSLFDFARRVDLKRVGKRPLEMLARAGAFDILDANRARVFEALDSLVAYS
AAVHEAKVSSQVSLFGEAGADIPEPRIANRDDWLPVERLAQEHMAIGFYLSGHPLDDYIA
ALKRKEIKTLAEVTKLAERGTCVVKMAGSVSARQERKSAKGNRFAFVSLSDPTGLYEVTV
FSDVLEAARDHLEPGRNVVLTVRADPDGDSVKLLANGVQPIDSVASEAGATALRIHLNRA
EAAASVAALLARVEGRSKAQVTICVPDDTGREIDVTLPQPYPVTPQIKGAIKAMQGVVLV
EDI
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgccccccgattcatccatctgcgtgtccataccgaacattcgctgctggaa
ggcgcgatccccgtgaagaagctggtcaagctggttgcggcggcagagatgcctgccgtg
gcggtgaccgataccaataacatgttctgcgcgttggagttttcggttctggccaaggat
gcggggctgcagcccatcgtggggtgccaagtcgctgtggcgcatgatccggcgcaagcg
ggggaaaagctacggatgcccgcgccggtggttctgctggcacagtccgaggcgggttac
atgaacctgatgaagctgaattcctgtctctatctggataaggcaggccagcttaatcag
gtcacgctggaggagttggagcggtactcggcgggcctgatttgcctgacgggcggggcc
gaggggccggtggggcggtttttgcagctggggcagggggccaaggcgcgtgcactgatg
gagcggttggcggcggcctttggtgaccggctttatgtagaattgcagcgccatccgggt
gagggtgggcgcctgacggaggccgagaccgcgacagagcggggtttcgtcgagatggcc
tatgacatgggcctgccgctggtggccacgaatgacgtctatttcccgaaatccgagatg
tatgaggcgcatgatgcgctgatctgcatcgcggagggggcctatgtggaccagagccag
ccgcgccgccgcctgacgccgcagcattatctgaagtccgaggcagagatgtgtgcgttg
ttcgccgatctgcctgaagcccttgaaaacactgtagagattgcgcggcgctgtgccttt
atggcggccaagcgcaagccgatcttgccgcgctttgccgatgacgaggtgcaggaattg
cgccgtcaggccaatgaggggctaaagaaccggctggccgtgatccctcatgctacgacg
gtggaagagtatcaggcccggctggatttcgagttggacatcatcgagaagatggggttc
cccggttactttctgatcgtgtctgatttcatcaaatgggccaaggcgcatgacatcccg
gtggggccggggcggggatcgggggcggggtcgttggtggcctatgctttgaccatcacg
gaccttgacccgctacgctatgcccttctttttgaacggtttttgaacccagaacgggtg
tcgatgccggacttcgacatcgacttctgcatggatcgccgggaagaggtgatccgctat
gtgcaggaacgctatggccgcgagaaggtggggcagatcatcaccttcggggcgctgctg
tcgaaggcggcggtgcgggatgtggggcgggttttgcagatgccttatgggcaggtggac
cggctgtcgaagatgatcccgctcgagggggtaaagccggtttccatcaccaaggccttg
gcggacgagccgcggctgcgggaggcggcgaaggaagaggtggtggggcgccttctgacc
tatgcggaacagatcgaggggctgtatcgcaacgcgtcgacccatgccgcgggggtggtg
atcggggaccgtccgctggatgagctggtgccgctgtatcaggacccgcggtcggatatg
ccggccacgcagttcaacatgaaatgggtcgaggcggcgggtctggtgaagttcgacttc
cttggtctgaagacgctgacggtgatccagaacgcgctggacctgttgaagctgcggggt
gtcacgctggatatcagcttgattccattggatgatcaaccgacttacgagctttatgct
gcggccaagacggtggcggtgttccaggtggaatcgagcggcatgatggatgcgctgcgg
cgcatgaagcccacctgtatcgaggatatcgtggcgctggtggcgctgtatcgccccggc
ccgatggagaacattcccgtctattgcgaggtgaagaacgggcagcgggagttggagtcg
atccacccgaccatcgaccatatcctgaaggaaacgcagggcatcatcgtctatcaggaa
caggtgatgcagatcgcgcaggtcatggcgggctattcccttgggggcgcggatttgctg
cgccgcgcgatgggtaagaagatcgccgaagagatggcaaaggaacggcccaaattcatc
gaaggggcaaaggctacccataatatcgacgccaagaaggcgggtgaagtctttgacctg
ttggagaaattcgccaattacgggttcaacaaatcgcacgccgccgcctatgctgtggtg
agctatcagacggcttacctgaaggcgaattacccggtggaattcatggcggcggtcatg
aattgcgatatccacctgaccgataagctggccgtctataagcgcgaggtggacaaactg
ggcatcacgacggtgccgccttgcgtgaaccggtcgctggcgacctttaccgtggtggag
gggcaggtcgtctatggccttggcgcgttgaagaatgtgggcgtcgatgcgatgcgcacc
atcgttgaggcgcggggtggccaagcctttgtttccctttttgattttgcgcggcgtgtc
gatctgaaacgggttggaaagcggcccttggagatgttggcgcgggcgggggcctttgac
attctggatgcgaatcgggcgcgggtgtttgaggcgcttgattcgctggtcgcctattcg
gcggcggtgcatgaggcgaaggtgtcttcgcaggtgtcgctgtttggcgaggcgggggca
gatatccccgaaccgcggattgccaatcgggatgattggttgcccgtggagcggctggcg
caagagcatatggcgattgggttttacctgtcgggccatccgctggatgactatatagcg
gcgctgaaacgcaaggaaatcaagactttggccgaggtgacgaagctcgcggagcggggc
acctgcgttgtgaagatggcggggtcggtgtcggcgcggcaggagcggaagtcggccaag
gggaaccgctttgcctttgtgtcgctgtctgatccgaccgggctttatgaggtgacggtg
ttttccgacgtgctggaagcggcgagggatcatctggaaccggggcggaatgtggtgctg
acggtgcgcgccgacccggatggcgattcggtcaaactgctggccaatggggtgcaaccg
attgattctgttgcctcagaggcgggggcgacggcgctgcgcatccatttgaaccgcgcg
gaggcggcggcgtcggtggcggccttgctggcgcgggtggaggggcggtcgaaagcgcag
gtcaccatctgcgtgcccgatgacacggggcgcgagattgatgtgacattgccgcagccc
tatccggtgacaccgcagatcaagggcgcgatcaaggcgatgcagggggtggtgctggtc
gaggatatctga
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