Fuscovulum ytuae: QF092_11290
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Entry
QF092_11290 CDS
T09905
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fyt
Fuscovulum ytuae
Pathway
fyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QF092_11290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fyt03019
]
QF092_11290 (recQ)
03400 DNA repair and recombination proteins [BR:
fyt03400
]
QF092_11290 (recQ)
Enzymes [BR:
fyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QF092_11290 (recQ)
Messenger RNA biogenesis [BR:
fyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QF092_11290 (recQ)
DNA repair and recombination proteins [BR:
fyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QF092_11290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
TtuA_LIM_N
Motif
Other DBs
NCBI-ProteinID:
WGV14869
LinkDB
All DBs
Position
2316714..2318756
Genome browser
AA seq
680 aa
AA seq
DB search
MTDPETLLRSVFGFTGFRPGQAEIVEAVTEGRNTLAIMPTGGGKSLCFQLPALCREGVTV
VISPLIALMRDQVRALRAAGVEAGALTSGNTEGETEEVFTALDQGRLKLLYIAPERLASA
ATLPMLRRIGTRLIAVDEAHCVSQWGHDFRPDYLRIGEVRRALGVPLAAFTATADEETRG
EIVTRLFDGVAPATFLRGFDRPNIHLAFAVKDNPRQQVLRFAAARKGQSGIVYCATRAKT
ETLAQALGEAGHLACFYHGGMDPEARRQVEARFQREDGLIVVATIAFGMGIDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDGAAAETMTLYGPDDIRLRRSQIDEGLAPPDRKAADHARL
NALLGLAEAVGCRRQVLLGYFGEAAGPCGNCDICDRPAVVFDATEAVRKALSAILRTGEW
FGSGHLIDILTGQATEKVRERGHDKLPTFAVGRELTRAAWGAVFRQMMGRDLVRPDPERH
GALRMTDAARPILRGEASITLRKDTVDAARPMVAVKALVSDEDAPLLSALKAKRRALAEA
AGVPAYVIFADRTLIEMAERRPATMDAMAGITGVGAKKLESYGAAFLEVICGAAQVLHPQ
RMRLAGREAGPVFDRLADVQVALSRGEDGTGKYLSVTHSTLRQIAERRPSTLAELQRIQG
MGEQKVERFGEAFLTVLREA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccgaaacgcttttgcggtccgtcttcggctttaccggctttcgacccgga
caggccgagatcgtggaggcggtcacagaggggcgcaacacgttggccatcatgccaacg
ggaggcggaaaatcactttgttttcaacttcctgcgctgtgccgggaaggcgtgactgtg
gtcatttcgccccttatcgcgctgatgcgggatcaggtccgggctttacgcgcggcggga
gtggaggccggggcacttacctctggcaatacggaaggtgagacggaagaggtattcacg
gcgctggatcagggtaggctgaagcttttgtatattgcgccggaaaggttggcatcggcg
gcgacgctgcccatgctgcgacggatcgggacgcggctgattgcggtcgatgaggcgcat
tgcgttagccaatggggccatgatttccgcccagattacttgcggatcggcgaggtgcga
cgggccttgggggtgccactggcggcctttaccgccacggcagatgaagagacgcggggc
gaaatcgtcacgcggctgtttgacggggtggcccctgcgaccttcctgcggggctttgat
cggccgaacatccatctggcctttgcggttaaggacaatccgcgtcagcaggtccttcgc
tttgccgccgcgcggaagggtcagtcgggcatcgtctattgcgcgacgcgggcaaagacc
gaaactttggcgcaggccctgggtgaggcggggcatctggcctgtttttatcacggcggg
atggaccctgaagcgcgacgacaggtcgaagcgcggtttcagcgcgaggatgggctgatc
gtggtcgcgacgattgccttcgggatgggcatcgacaagccggatatccgctgggtggcc
catgccgacctgccaaagtcgatcgagggctattatcaagagatcgggcgcgcgggccgc
gatggagcagcggcagaaacgatgacgctttacggtccggacgacatccggttgcggcga
tcacagattgacgaaggactggcgccaccagatcggaaagcggcggaccatgcgcggctg
aatgcgctgctggggctggccgaggcggtgggatgccgtcggcaggttttgctgggatat
tttggcgaggcggcggggccatgcgggaattgcgacatctgcgaccgtccagccgtggtg
tttgatgcgacagaggccgttcgtaaggcgctgtcggcgatcctgcggacgggggaatgg
ttcgggtcggggcatctgatcgatatcctgacggggcaggcgaccgagaaggtgcgcgag
cgggggcatgacaagctgcccacctttgccgtgggacgcgaattgaccagggctgcatgg
ggggcggtgttccgccagatgatgggccgcgatcttgtgcggcccgacccggaacggcat
ggtgccttgcgcatgacggatgcggcgcggccaatcctgcggggggaggcgtcgatcacc
ctacggaaggatacggtcgatgcggcgcggccgatggtggcggtgaaggcgctggtatcg
gatgaggatgcaccgctgttgtcagcgctgaaggccaagcggcgagctttggccgaggcg
gcgggggttccggcatatgtgatatttgccgaccggaccctcatcgagatggccgagcgg
cggcccgctacgatggatgcgatggcggggattacaggtgtgggggcgaaaaagcttgaa
agctatggcgcggcgtttcttgaggtgatctgcggcgcggcacaggttcttcatccgcaa
cgaatgcggctggcggggcgcgaggcgggaccggtctttgatcggctggccgatgtgcag
gtggctttgtcacggggcgaggacgggacggggaaatatctgtcggtgacgcattccacc
ttgcggcagatcgcggagcggcggccatcaacgctggcggaattgcagcggatccaaggg
atgggcgaacagaaggtggaacggttcggcgaagccttccttacggtcttgcgcgaggcg
tga
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