Fuscovulum ytuae: QF092_13050
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Entry
QF092_13050 CDS
T09905
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fyt
Fuscovulum ytuae
Pathway
fyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QF092_13050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fyt03019
]
QF092_13050
03009 Ribosome biogenesis [BR:
fyt03009
]
QF092_13050
Enzymes [BR:
fyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QF092_13050
Messenger RNA biogenesis [BR:
fyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QF092_13050
Ribosome biogenesis [BR:
fyt03009
]
Prokaryotic type
rRNA helicases
QF092_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
WGV15199
LinkDB
All DBs
Position
complement(2710043..2712442)
Genome browser
AA seq
799 aa
AA seq
DB search
MKEMMIAAPLAAALAAKGYDSLTAVQEAVLGDELAARDLLVSAQTGSGKTVAFGLAIAQD
VLAGQDRLLFADKPLALIVAPTRELALQVRREFEWLYAEAGAMLASCVGGMDYRNERRAL
ERGAHVVVGTPGRLRDHIERGSLDLSGVKAVVLDEADEMLDLGFAEDLEFILAAAPEDRR
TLMFSATVPKEIERLAGTFQHDAMRIVAQGEAKQHVDIEYRALSVQARDREHAIFNLLRF
YEARTAIVFCKTRANVNHLYARMANRGFQAVALSGELSQSERMHALQALRDGRARVCIAT
DVAARGIDLPGLELVVHADLPSNSETLLHRSGRTGRAGRKGVSALIVPPAEFRKAQRLLQ
GAKVEAEWGKAPGADEVQAREDMRLLEHSALGLPPGDEESMGAALIERYGAEQVAAAFVR
LWREGRSAPEVLSDSLPPPAALPPREKGDFGPSVWYRLSVGHTRRAEARWLLPKICETGG
IAKDGIGAIRVQQEVTFVQIAAPLANRFGNEVEIEPELVMTRLEGEPSMDRSPRERPVRP
ERTERPERRVSPRPAREDRGDRPSYSGKPPRIVEDEDKLVGETAPSSGGKWHPESPTVTR
PKPHAAAPRNKGDDAERTPRAKPAYSPRAASQSAAEPTKRAPREGGDWSSKGSEYAPKER
RDDSERKPRWKNEGSGPRSAGYKSHGGSPDRPARASGFKSHAAEGRAVTERPTGKTGGWK
SAEGRKERPDGTQKPAARTDGKKPYAPRNAGAEAKPFRAKAGGKPGTGGFAKPSSKPRPE
KPKADARDTSKRFVPPKKK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgatgattgccgcgcccttggctgcggcattggcggccaagggctatgat
agcctgactgccgttcaagaagccgttcttggtgacgagctggcagcgagggaccttctt
gtttccgcgcaaaccggatccggtaagacagtcgccttcggacttgcgattgcgcaggat
gtgcttgccgggcaggaccgtctgcttttcgcagacaaaccccttgccctgatcgttgcg
ccgacgcgcgaactcgctctgcaagtgcggcgcgaattcgaatggctttacgccgaagcg
ggtgcgatgctggcttcttgcgttggtgggatggattatcgcaacgaacggcgggcgctg
gaacgtggtgcgcatgtcgtcgttgggacgccgggccgcttgcgtgaccatattgaacgc
ggatcgctagatctgtctggcgtcaaggccgtcgtcttggacgaagcagatgagatgctc
gatcttggctttgccgaggatcttgaattcatccttgccgccgcgccggaagaccgtcga
accctgatgttttccgccaccgttccaaaagagatcgaacgtttggccggcactttccag
cacgatgcgatgcggatcgttgcgcagggtgaggcgaagcagcatgtcgacatcgagtat
cgcgccctatccgtacaggcccgtgaccgggaacatgcgatcttcaatcttctgcggttt
tacgaggcgcgcacggctatcgtcttctgcaagacccgcgcgaatgtgaatcacctttac
gcccggatggccaatcgtggttttcaagccgtcgccctatcgggtgagctgagccagtca
gaacgcatgcatgccctgcaagcgctccgcgatgggcgggcgcgggtatgtattgccact
gatgttgccgcacgtgggatcgacctgccggggttggaacttgtggttcatgccgacctt
ccctccaattcggaaacgctgctgcacaggtctggccgcaccggtcgcgcagggcgcaaa
ggtgtatctgccctgatcgttccgcccgccgaattccgcaaggcacagcgccttttgcaa
ggtgcaaaggtagaggcagagtggggcaaggcccccggcgcggatgaagttcaggcgcgt
gaagatatgcgtttgttggaacatagcgcccttggtttgccgcccggggatgaggaatcg
atgggggctgccctcattgaacgatatggcgcagaacaggttgctgccgcctttgttcgc
ctttggcgggagggacggtccgcgcctgaggtcctatcagatagcctgccacccccggct
gccctgcctccgcgggagaagggtgattttggcccatccgtgtggtaccgcctttccgtg
ggccatacccggcgggcagaggcacgctggctgctgcccaagatttgtgaaaccgggggc
atcgcgaaggacggcatcggcgcgattcgcgtgcaacaagaggtgactttcgttcagatc
gcagcgcccctcgccaaccgttttggcaatgaggtggagatcgagccagagttggtgatg
acgcgccttgaaggcgaacccagcatggaccggtcaccgcgcgaacgtcctgtccgcccc
gaacgtaccgaacggcccgaacgacgcgtctcgccccgcccggcacgcgaagatcgtggt
gatcgtccaagttattccggcaaaccgccccggatcgtggaagatgaagacaagctggtc
ggagaaacggcacccagctcgggcggaaaatggcatcccgaatcccccacggtcaccaga
cccaaaccgcacgcagcagcacctcgaaacaagggcgatgatgcggagcgcacccctcgc
gccaaaccggcctacagccctcgcgctgcatcgcagagcgcggccgaacctactaaacgg
gctccacgagagggcggagattggtcaagcaagggtagcgaatatgcgcccaaagagcgg
cgcgacgacagtgaacgcaagccccggtggaagaacgaaggtagtggtccgcggtctgcc
ggttataaatcgcatggcggcagcccggatcgtccggcccgcgcctctgggttcaaaagc
catgctgccgagggcagggcggtaaccgaacggcctactggcaaaaccggcggatggaaa
tcagcagaaggtcggaaggaacggcctgacgggacgcaaaaacccgctgcgcgcaccgat
ggcaagaaaccctacgctccgcgcaatgcgggcgcagaggcaaaacctttcagagcaaag
gcaggcggcaaacccgggaccggtggctttgccaagccgtcgtcaaaacctcggccagaa
aagccgaaggcagatgcgcgcgatacatcaaagcgctttgtgccgccgaagaaaaagtga
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