Fuscovulum ytuae: QF092_16070
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Entry
QF092_16070 CDS
T09905
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fyt
Fuscovulum ytuae
Pathway
fyt03030
DNA replication
fyt03410
Base excision repair
fyt03420
Nucleotide excision repair
fyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QF092_16070 (polA)
03410 Base excision repair
QF092_16070 (polA)
03420 Nucleotide excision repair
QF092_16070 (polA)
03440 Homologous recombination
QF092_16070 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fyt03032
]
QF092_16070 (polA)
03400 DNA repair and recombination proteins [BR:
fyt03400
]
QF092_16070 (polA)
Enzymes [BR:
fyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QF092_16070 (polA)
DNA replication proteins [BR:
fyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QF092_16070 (polA)
DNA repair and recombination proteins [BR:
fyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QF092_16070 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QF092_16070 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
WGV15752
LinkDB
All DBs
Position
complement(3318116..3320953)
Genome browser
AA seq
945 aa
AA seq
DB search
MGFGKGCHLHLIDGSAYIFRAYHALPPLTRKSDGLPIGAVSGFCNILFRYLEGNKGPDAP
NGAPTHVAVIFDHSSETFRNAIYPLYKANRPELPEDLRPQFPLTRDATRAFNIACIETEG
YEADDIIATLAARATEAGGDVTIISSDKDLMQLVGPGVMMFDPMKSRAIGPDEVFEKFGV
APNRVVDVQSLAGDSVDNVPGAPGIGIKTAALLIQEYGDLETLLTRATEIKQPKRREALI
DNADLIRISKQLVQLKADTPLDVTLDDLEVRPPEPDTIMDFLTRMEFRTLTRRVADSLKI
APPAPLPETQGTNPNHPDPVTPDRLPFDHAAYEAVTTEDALHAWIATIRDHGTVAVDTET
TSLDEMRAELVGISLSVTTGKAAYIPLTHRSGTDDLFGSAKLADGQLPVGTVLSALKPVL
EDPAILKIGQNMKYDWKIFARHGIRITPFDDTMLMSSALHAGLNSHGMDALSETHLGHTP
IPIKSLLGSGKSAITFDRVAIPDAVKYAAEDADITLRLWQHFKPQLHRAQVTTVYETLER
PLVPVLAEMEMAGVMVDRDTLSRMSNAFAQKMAGLEAEIQEIAGAAFNVGSPKQLGEVLF
DKMQVPGGERGKTGAYATGADILEDITTLEDTHPDAARLAARVLDWRQIAKLKSTYTDAL
QDHIHPETGRVHTSYSITGAVTGRLSSTDPNLQNIPVRTEEGRRIREAFVAPKGRLLVSL
DYSQIELRILAHIADIPELQQAFRDGLDIHALTASEMFNVPLDQMTPDIRRQAKAINFGV
IYGISGFGLARNLRIPRAEAQGFIDRYFQRFPGIKGYMDSTIKEAQARGFVTTLFGRKIH
TPEINAKGPTAGFAKRAAINAPIQGTAADVIRRAMIRMPAAIADLPAKMLLQVHDELLFE
VDEDAASTLAARAKEVMEAAAHPAVAFKVPLIVEAGQGRTWAEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgggctttggcaagggctgccacctgcacctgatcgacggatcggcctatatcttccgc
gcctatcacgcgcttcccccgctcacgcggaaatccgacggtctgcccatcggcgccgtc
tcgggcttctgcaacatcctcttccgttatcttgaaggcaacaaaggccccgacgccccg
aacggtgcccccacccatgtcgcggtcatcttcgaccattcgtccgagacgttccgcaac
gccatctacccgctctacaaggccaaccgccccgaactgcccgaagacctccgcccgcaa
ttccccctcacccgcgatgccacccgcgccttcaacatcgcctgcatcgagaccgagggc
tatgaggcggacgacatcatcgccacccttgccgcccgcgcgaccgaagcaggcggcgac
gtcacaatcatctcctccgacaaagacctgatgcagcttgtcggccccggcgtcatgatg
ttcgacccgatgaaatcccgcgccatcggccccgatgaggtcttcgaaaaattcggcgtc
gcccccaaccgcgtcgtcgatgtgcaatccctcgcgggcgacagcgtcgataacgtcccc
ggcgcccccggcatcggcatcaagaccgccgccctcctgatccaggaatatggcgatctc
gaaacccttctcacccgcgcgaccgagatcaagcagcccaaacggcgcgaggcactgatc
gacaatgccgacctcatccgcatctcgaaacagctggtgcagctgaaggccgacaccccc
ctcgatgtcacgcttgatgatctggaggttcgcccccccgaacctgacacgatcatggat
ttcctcacccggatggaattccgcacgctcacccgccgcgtggccgatagccttaagatc
gcgcccccggcccccctgcccgaaacccaaggcaccaaccccaaccaccccgacccggtc
acccctgaccgcctccccttcgaccacgccgcctacgaagccgtcaccaccgaagacgcg
ctccacgcatggatcgccacgatccgcgaccacggcaccgttgccgtcgataccgaaacc
accagcctcgacgagatgcgggccgaactcgtcggcatctccctttccgtcaccaccgga
aaggccgcctatatcccgctcacccaccgctccggcacggatgaccttttcggctcggcc
aaactcgccgatggacagcttcccgtaggcaccgtcctttccgccctaaaacccgttctc
gaagaccccgccatcctcaagatcggccagaacatgaaatatgactggaagatcttcgcc
cgccacggcatccgcatcacccccttcgacgacacgatgctcatgtcctcggcccttcat
gcgggcctcaattcccacggcatggacgcgctctccgaaacccatctcggccacacgccc
atcccgatcaaatccctcctcggcagcggtaaatccgccatcaccttcgaccgcgtcgcc
atccccgatgccgtgaaatacgccgccgaagatgccgacatcacgctccgcctctggcag
catttcaaaccgcaactccaccgcgcacaggtgacgaccgtctacgaaaccctcgaacgc
cccctcgtcccggtgctggcggaaatggaaatggcgggggtcatggtcgaccgcgacacg
ctgtcccgcatgtccaacgccttcgcgcaaaagatggcagggcttgaggccgaaatccaa
gaaatcgcgggcgcagccttcaacgtcggatcgcccaaacaactgggcgaagttctcttc
gacaaaatgcaggttcccggcggcgaaaggggcaagaccggggcctatgcgaccggggcc
gatatcctcgaagacatcaccacgctggaagacacccatcccgatgccgcccgccttgcc
gcccgcgtcctcgactggcgccagatcgcgaaactcaaatccacctataccgacgcgctg
caagaccacatccaccctgaaacgggccgcgtccacacctcctattccatcacgggcgcg
gtgacgggccgcctctcctccacagatccgaacctccagaacatccccgtccgcaccgaa
gaaggccgccgcatccgcgaggctttcgtcgccccgaaaggccgcctcctcgtctcgctc
gactacagccagatcgaattgcgcatcctcgcccatatcgccgatatccccgaacttcag
caggccttccgcgacgggctcgatatccacgccctgacggcgtccgagatgttcaatgtc
ccgcttgaccagatgacccccgatatccgccgtcaggcaaaggccatcaatttcggcgtc
atctacggcatttccggcttcggccttgcgcgcaacctgcgcatcccgcgggcagaggcg
caaggtttcatcgaccgctatttccagcgcttccccggcatcaagggctatatggacagc
accatcaaagaggcacaggcgcgcggcttcgtcaccaccctctttgggcgcaagatccac
acgcccgaaatcaacgccaaaggcccgaccgcaggctttgccaaacgcgccgcgatcaac
gcccccattcagggcactgccgccgacgtgatccgccgcgccatgatccgcatgcccgcc
gccatcgcagatctgcccgccaagatgttgctgcaagttcatgacgaactgctcttcgaa
gtggacgaagacgccgcatccaccctcgccgcccgcgccaaagaggtgatggaggccgcc
gcccaccccgccgtcgccttcaaggtccccctgatcgtcgaggcaggtcagggccgcaca
tgggccgaagcgcattga
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