Galbibacter sp. BG1: HX109_00110
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Entry
HX109_00110 CDS
T06675
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
gaa
Galbibacter sp. BG1
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gaa01011
]
HX109_00110
Enzymes [BR:
gaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HX109_00110
Peptidoglycan biosynthesis and degradation proteins [BR:
gaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HX109_00110
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GFIT
Motif
Pfam:
SLT
SBP_bac_3
SLT_2
Lig_chan-Glu_bd
Phosphonate-bd
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QLE00035
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Position
complement(48006..49469)
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AA seq
487 aa
AA seq
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MRRYFFLLCVLLFSCETESSSNKNKSVDTETLDTLPSAKEAQKEIVYRDLDAIKEEGILR
ALVVYSSTSYFLYRGQTMGFEYELLKGLAEDLGVKLEVKIVDNLNHLIDALLAGEGDIIA
HGLTISSERKEKVAFSDYLYLTKQVLVQKKPDNWRTLNWAKLDRALIHDPMELLGDTVSV
RKNTAYFQRIKNLSEELGGTIHIDTIKGSYSTDEVMEKVSNGEVKYTVADDYLANLQASY
YSNLDVSVPVSFSQRIAWAVRPSSKNLLAEVNNWVVRIRKDVDYIVTYRKYFKNTRSFNR
RIKSDFFSLNTNEISPYDDIIKKGADYLEWDWRLLSSLIYQESRFDPTTTSWAGAMGLMQ
LMPGTANDMGVDNITDPTENITGGSKYLKKLYDYYNFIPDAEQRIKFTMAAYDCGFRHIE
DAITLTKMNGLDKNTWDNNVENMLLALSKEENYRKEGIKYGYVKGTEPYNYVESIFRRYD
HYQDFIK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgatatttctttcttttatgtgtactgctttttagctgtgagacagaaagttct
tcaaataaaaataaatctgttgatacagaaactttggatacccttccttccgcaaaggag
gctcagaaagaaattgtatatcgggatctagatgccatcaaagaggaaggaattttacgt
gctttggtggtatatagttccaccagttattttttataccgaggtcaaactatggggttt
gagtatgaacttctaaagggattggcagaagatttaggagtaaaactagaggttaaaata
gtggataatttaaatcatttaatagatgctttattggctggcgaaggggatattattgca
cacggtttgaccatctcttcagaaagaaaagaaaaagtggctttttcagattatttgtac
ttaacaaaacaagtcttggtacagaagaaacctgataattggcgcactttaaattgggca
aaattagacagggctttaattcacgacccaatggagttattgggggatacggtaagtgta
agaaagaatactgcctattttcagcgtattaaaaatctttccgaggaattgggagggacc
atacatatagataccataaaagggagttattctacagatgaagtaatggagaaggttagc
aatggtgaagtaaaatatactgttgcagacgattatttggcaaatttacaagcttcttac
tattcaaatttagatgtgtctgtgcctgtgagtttctcacagcgtattgcttgggctgtt
aggccatcttctaaaaatctgttggctgaagtgaataattgggtcgtgcgcattcggaag
gatgtagattatattgtaacctaccggaaatattttaaaaatacgagaagctttaatcga
agaattaaaagcgattttttcagtcttaataccaatgaaattagtccgtatgatgatatc
attaaaaaaggagccgattatttagaatgggactggcgtttgctatcttcacttatttat
caagaatcccgttttgatcccactaccacttcttgggcaggggcaatggggctaatgcag
ttaatgcctggcactgccaatgatatgggcgttgataatataacagatcctacggaaaat
atcacaggcggatctaaatatttaaaaaagctttacgattattacaattttattcctgat
gctgaacagcgtattaaattcacgatggccgcttacgattgtgggtttcggcatattgaa
gacgccataaccttgacaaagatgaacgggcttgataaaaacacatgggacaataatgtg
gaaaacatgttgttagcgctaagcaaagaggaaaactaccgtaaagaaggtataaaatat
gggtatgtaaaagggacggagccttataactacgtagaaagtatttttagaagatacgat
cattatcaggattttattaaataa
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