Galbibacter sp. BG1: HX109_04495
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Entry
HX109_04495 CDS
T06675
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gaa
Galbibacter sp. BG1
Pathway
gaa03030
DNA replication
gaa03410
Base excision repair
gaa03420
Nucleotide excision repair
gaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HX109_04495 (polA)
03410 Base excision repair
HX109_04495 (polA)
03420 Nucleotide excision repair
HX109_04495 (polA)
03440 Homologous recombination
HX109_04495 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaa03032
]
HX109_04495 (polA)
03400 DNA repair and recombination proteins [BR:
gaa03400
]
HX109_04495 (polA)
Enzymes [BR:
gaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HX109_04495 (polA)
DNA replication proteins [BR:
gaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HX109_04495 (polA)
DNA repair and recombination proteins [BR:
gaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HX109_04495 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HX109_04495 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
DUF1510
Pro-kuma_activ
ACS_CODH_B_C
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QLE00861
LinkDB
All DBs
Position
1039088..1041913
Genome browser
AA seq
941 aa
AA seq
DB search
MQDQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLLDVIKRENPDHLAV
AFDKEGSKDRVEMFEAYKANRDETPEAIRIAVPIIQDILKAMHIPCIEKAGYEADDIIGT
LAKQAEKANYKVYMVTPDKDFAQLVSENIFMYRPARMGNGIEIWGIPEVQKKFEVETPEQ
VIDFLGMMGDSVDNIPGLPGVGEKTAKKFLKEFGSMEALLANTDKLKGKMKEKVEENAEQ
GILSKKLARIMLDVPVEFHEEDYKLDTPDIPKVQEIFQELEFRRLADNLMKTFGQETAPE
EETSEGNTANVNSNLDVQYDLFGNNEAAESATTTVSGFKTIEQVPHFYQQANTPLARKLL
LEKLLQQKSVCFDTETTNIKSLEAELVGCAFSWEPGTGHYVSFPEDQKETKAILEEFRPF
FENEEIEKIGQNLKYDLKVLSNYNMPVKGPIFDTMIAHYLINPDMRHNMNVLAETYLNYS
PVSIETLIGKKGKNQRSMRSVELEKQTEYAVEDADITLQLKNLFAEELPKRNAKKLFEEI
EAPLVKVLSDMEIEGINLDENYLKSLSGALNTDIDRLEKAIFEQAGEEFNLASPKQLGPI
LFDKLKLVDKPKKTKTGQYSTAEDVLSYLAKDHQIVADILEWRQLNKLKSTYVDALPNEI
NSRTHRIHTVYSQAVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRDENYTLLAADYS
QIELRIIAALSEEDTMIKAFQEGQDIHVTTASQVFKVAIEDVTREQRSNAKTVNFGIIYG
VSAFGLSNQTTLNRSEAKELIDTYYETYPKLKAYMSKQVHYAQDNGYVETILGRRRYLKD
INSRNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHQKLKEGNFKTKMLLQVHDELVFD
AHKDELDTVKTLIKTEMENAYKLSVPLDVELGTGDNWLEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcaaaaacggctttttcttttagacgcttacgctttaatttttagagggtat
tacgcattcataaaaaatccacgtattaattccaaaggtatggatacttctgctattatg
gggtttatgaattccctcttggacgtaattaaaagagaaaatccagatcatttagcggtt
gctttcgataaggaaggcagcaaggaccgtgtggaaatgtttgaagcttacaaagccaat
cgcgatgaaacgccggaagccattcgtattgcagtaccgattattcaagatattttaaaa
gccatgcatattccctgcatagaaaaagcgggatatgaagccgatgatatcattggaaca
cttgcaaagcaggcggaaaaagccaactataaagtttacatggtgactcccgataaagat
tttgcccagttggtttctgaaaatatatttatgtaccgcccagcaagaatgggaaatggt
attgaaatttggggaattccggaggtacaaaagaaatttgaagtagaaactccagaacag
gttattgattttctcggaatgatgggggattcggttgataacattccaggtttaccaggc
gtgggagaaaaaacggcgaaaaagtttttaaaagaatttggtagcatggaagcactttta
gcaaataccgacaagctaaaaggaaaaatgaaggaaaaagtagaagaaaatgcagaacag
ggaattctatctaaaaaactggcacgcatcatgctggatgtaccagtagaatttcatgaa
gaagactataaactggatactcccgatattccaaaagtgcaagaaatctttcaagaattg
gagtttagaaggctcgccgataaccttatgaaaaccttcggacaggaaacggctccagag
gaagaaacttccgaagggaatacagccaatgtaaactctaatttagacgttcaatacgat
ctttttgggaacaacgaggctgctgaaagtgctacaactacagtttctggattcaaaacc
attgaacaggtaccgcatttttaccaacaggccaacacaccgttggcacgaaaactattg
ctggaaaagctattgcaacaaaaaagtgtttgttttgacacggaaaccacgaacataaaa
tccttggaagccgagctggttggctgtgcgttttcatgggaacctggaacggggcattat
gtttctttccctgaagatcaaaaggaaacaaaagcaattttggaagaatttcgaccgttt
tttgaaaacgaggaaattgaaaaaataggacaaaatcttaagtacgacctcaaagttttg
tccaattacaacatgcctgtaaaaggccctatttttgataccatgattgcgcattatctt
atcaatccagatatgcgtcacaatatgaatgtcctcgcagaaacctatttaaattacagt
ccggtttccatagaaacccttatagggaaaaaaggcaaaaaccagcgttccatgcgatcc
gtagaattggaaaaacaaacggagtatgcggttgaagatgctgatattacccttcagtta
aaaaatctttttgctgaagaactaccgaaacgaaatgcaaaaaagctttttgaagagatt
gaagctccgctggtaaaagtgctttccgacatggaaattgagggaatcaatttagatgaa
aactacctgaaaagtttaagtggcgctctaaataccgatatcgatcgtctggaaaaagcc
atttttgaacaagctggggaagaattcaatttagcatccccaaagcaattaggtccgatt
ttatttgacaaattgaagctagtcgacaaaccgaaaaagaccaaaacaggtcaatattcc
actgcggaagatgtactttcgtatctggcaaaagatcatcaaattgtagctgatattttg
gaatggcgccaattgaacaagctcaaaagcacctatgtggatgcgcttcccaacgagata
aattccagaacgcatcgcattcatactgtttacagtcaggcggtagcggcaaccggaagg
ttgagttccaacaatccgaatttgcagaatatcccgataagaaccgaaagaggaagacag
gttcggaaggcttttgttccaagagatgaaaactacactttgctagccgcggattattca
caaattgaactccgcattatcgcagcgttaagtgaggaggacaccatgataaaagccttt
caagaaggtcaggatattcacgtaacaacggcttcacaagtgttcaaagtagctattgaa
gatgttacccgcgagcagcgaagcaatgccaaaacagtaaacttcggtattatctatgga
gtttccgctttcggactaagcaaccaaactaccttgaatagaagtgaagccaaagaatta
atagatacctattatgaaacatatcctaaattaaaggcatacatgagcaaacaagttcat
tatgcgcaggataacggttatgtggaaaccattttaggaaggcgtcgttatttaaaagat
attaattcccgtaatcaagtggttagaggagccgccgaaagaaatgccgtaaatgctcca
atccagggaagcgctgcagacatcattaaaattgcgatgattaatattcaccaaaaacta
aaagaaggcaattttaaaaccaaaatgctgcttcaagtgcacgatgaattggtattcgac
gcccataaagacgaactggacaccgtaaaaaccctcatcaaaaccgaaatggaaaacgca
tacaaactaagcgtaccattggatgttgaactgggcacaggcgataactggttggaggcg
cattga
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