Galbibacter sp. BG1: HX109_05655
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Entry
HX109_05655 CDS
T06675
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
gaa
Galbibacter sp. BG1
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gaa01011
]
HX109_05655
Enzymes [BR:
gaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HX109_05655
Peptidoglycan biosynthesis and degradation proteins [BR:
gaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HX109_05655
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
QLE01075
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Position
1289955..1291541
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AA seq
528 aa
AA seq
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MKKVFTALMISAFCTLTYAQKKTNTLQPQKQLSITSDSTTVVEGNLLQDTDSVLIDGKRY
VLAEEKTKRYGFPDNPQAKKIDSLWKREFFNTGMFDTIYADISNLTFEPVEYVDLPTDTL
KARLAKLNQKTPFNVEYNPSLESVIKMFLKSKRAFLTRVMARSKFYFPLFEQTMDNYDIP
LEMKYLAVIESALNPKAKSRVGATGIWQFMFPTGKMYGLDVSSYVDERSDPIKSTEAACK
YLGKLYEIFGDWDLALAAYNSGPGNVSKAIRRSGGSNNYWNLRPFLPRETAGYVPAFLAT
MYIMEYAEEHGFEEFASNEAGYYFETDTVNIKKLISFDQISEYLEIDREEVQFFNPSYKL
DIIPYVDDENYSLRLPTEAIGRFVTNEDSIYARVAKELEKKEQPLPELVETSAQIKYRVK
SGDVLGTIAEKHGVRVSEIKRWNGLRNNNIRIGQRLTIFPQKPVTSTSTKSPTASNNNAS
KEYVVRSGDSLWSIAKKFPGISIQNIQEWNDISGNKLTPGTKLVLCKC
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtttttacagcgctgatgatcagtgctttttgtaccctcacttacgcccaa
aaaaagactaataccttacaaccacaaaaacaactatctattacttcagatagtactact
gtagttgaaggaaatcttttacaagataccgattccgtcctaatagatgggaaacgttac
gttttggcagaagaaaaaacaaaacgctacgggtttccagataatccacaggccaaaaaa
atagacagcctctggaaaagggaatttttcaatacaggaatgttcgatactatctatgca
gatatttccaacctcactttcgaacctgttgaatatgtagatcttcctacagatacttta
aaggcacgattggcaaaacttaatcaaaaaacgccttttaacgtagaatataacccttct
ttggaaagtgttatcaagatgtttttaaaaagtaaacgtgcttttttaactagggtgatg
gcgcgaagtaaattctattttccactgtttgaacaaaccatggataattacgatattcct
ctggaaatgaaatatttggcagttatagaatctgccttaaatccaaaagcaaaatctaga
gtgggagcaactgggatctggcaatttatgtttccaaccggtaaaatgtacggcctggat
gtaagtagttatgtagacgagcgtagcgaccccataaaatcgaccgaagctgcctgtaaa
tatttagggaaattgtacgagatatttggggattgggatttggcacttgctgcctataat
tcagggccaggaaatgttagcaaagccattcggcgaagtggaggctccaataattattgg
aatttaaggcctttcctaccaagggaaactgcaggttatgtaccagcgtttctagctacc
atgtacattatggaatatgcagaagaacatggttttgaagaatttgcttccaatgaagct
ggctattattttgaaacggatacggtaaatattaaaaaattgatttcttttgatcaaatc
tcagaatatttggagatcgatagagaagaagttcagtttttcaatccttcatataagtta
gatatcattccctacgtagacgacgaaaactacagtttgcgtttacctacggaagcaata
ggccgatttgttaccaatgaagattctatttacgcccgagttgccaaagaacttgaaaag
aaggaacaaccattacccgaattggtagaaacaagtgcccaaataaaataccgtgttaaa
agtggtgatgttttaggtaccattgcggaaaaacatggtgtaagggtaagcgagattaaa
cggtggaatgggttacgaaataataatattcgcatcgggcaacgtttaaccatattccct
caaaaaccagtgacttctacctctacaaagtcgcctaccgctagcaataacaatgcttcc
aaagaatatgtggtgcgtagtggcgattctctatggagcatcgcaaaaaaatttccggga
atttccattcaaaatattcaagaatggaacgatattagtgggaataaattaacgccggga
accaagttggttctttgcaagtgttaa
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