Galbibacter sp. BG1: HX109_07515
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Entry
HX109_07515 CDS
T06675
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gaa
Galbibacter sp. BG1
Pathway
gaa03030
DNA replication
gaa03430
Mismatch repair
gaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HX109_07515
03430 Mismatch repair
HX109_07515
03440 Homologous recombination
HX109_07515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaa03032
]
HX109_07515
03400 DNA repair and recombination proteins [BR:
gaa03400
]
HX109_07515
Enzymes [BR:
gaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HX109_07515
DNA replication proteins [BR:
gaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HX109_07515
DNA repair and recombination proteins [BR:
gaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HX109_07515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
RNase_H_2
DEDDh_C
Rv2179c-like
PHM7_cyt
AdoMet_dc
Motif
Other DBs
NCBI-ProteinID:
QLE01418
LinkDB
All DBs
Position
1698767..1700143
Genome browser
AA seq
458 aa
AA seq
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MKFAIIDVETTGLSGSGNKTTEIAIVIHDGKRIVNEYHTLVNPEALITRHVVGLTGIDNE
MVATAPTFKEIASEVFELTKDCVFVAHNVNFDYNVIRNEFKSLGVDFSRKKLCTVRLSRK
VFPGLRSYSLGKLCNYLEIPLFDRHRAKGDTDATVILFEMLLKNDSQGEIGKQLKSRNGE
ASLPALLAKETYYNLPERPGIYYFKNANGEIIYVGKAINIKKRVLSHFYDKKAKEIALCR
ETSHIDFEESGSELVALLMESAAIKHHYPKYNRAQKVSNKGYAILAYTNRKGIVQLGFNK
SNLVLNPIALFFTVNECMQFLESITETFQLCPKYTQLISSGTAAGKCKHYRLTNCKGICE
EKEAVEHYNKRVEEALNSIKIENKSFAIITKGKTLSEKAVVLIENGIYKGFGFLDETISI
SEFEEFRDYIKLQKNNSDVVKIVQQYILKNENAEVVYG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgccataatagatgttgaaactacaggtttaagtggaagcggtaataaaact
accgaaatcgctattgttattcacgatggaaaaagaatagtgaatgaataccataccttg
gttaatccagaggctttaataaccaggcatgttgtaggtttaacgggtatcgataatgaa
atggtagctaccgcgcctacttttaaggaaattgcatcagaggtattcgaacttaccaaa
gattgcgtttttgtggctcataatgtaaacttcgattacaatgttatccgcaatgaattt
aaaagtctgggtgtagatttcagcagaaaaaaattatgtacggtgaggctctccagaaag
gttttcccaggattgcgttcttacagtttaggtaagctatgcaattatttagaaatccca
cttttcgataggcatcgagccaaaggagataccgatgcgaccgttattttatttgaaatg
ctgcttaaaaatgatagtcaaggggagatagggaaacaactgaaaagcagaaatggagaa
gcttcgctgcccgctcttttggcaaaagaaacctactacaacttacccgaaagaccaggg
atctattattttaaaaacgccaatggggaaattatatacgtggggaaggccattaacatc
aaaaagcgtgttcttagtcatttttacgataaaaaagcaaaagaaatagccttatgcagg
gaaacttcacacatcgatttcgaagaatcgggatcggagttggtggctttgcttatggaa
tctgcagctattaaacatcattaccccaaatataatagagcacaaaaggtaagtaataaa
ggttacgcaattctagcatatactaataggaaagggattgtacagcttggtttcaacaaa
tctaatttggttttaaatcctattgcattatttttcacggtgaacgaatgcatgcagttt
ttagaatcaataaccgaaacctttcaactttgtccgaaatacacccaactaatttcttca
ggaactgcagctgggaaatgtaagcattaccgacttacaaattgcaaaggtatctgcgaa
gaaaaggaagccgttgaacattacaataaaagagttgaagaagccctgaattccattaaa
attgaaaataaaagctttgcgattattaccaagggaaaaactctttctgaaaaggccgtg
gtgttgattgaaaatggaatctataaaggtttcgggtttttggatgaaacaatttctatt
tctgaatttgaagaatttagagattatataaaacttcaaaaaaataatagcgacgtagta
aaaattgttcagcaatacattcttaaaaacgaaaacgctgaggtagtttatgggtga
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